| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586503
Identifier: 229586503
GI number: 229586503
Start: 341251
End: 342321
Strand: Direct
Name: 229586503
Synonym: RAF_ORF0315
Alternate gene names: NA
Gene position: 341251-342321 (Clockwise)
Preceding gene: 229586500
Following gene: 229586506
Centisome position: 26.69
GC content: 28.01
Gene sequence:
>1071_bases ATGTCAAAAAAATCAAGGGTTAGAAAAATATTTAATAAGTTAAAATCTTATTGGACTAGTTTTAGACAAAGTAAAATCGG TAAAATATTATTTAGCAATAGTTTAAGTTATGCAGTTTCCATAGCTTCTATAGCAATTACAGTTTCTGGACTTTTTACTC CTATATCACCGATAATTATAGCTGTAGCTGTTGTTTCAGGAGTTAGCGTAGGAATTCAAGCTGTAAATGAGACTTTGAAA GTGCATGATTTGCGTAAACTTCATAAAGAGAATAATTTATTAGTACATAACAGAAATGCTAAAAGTCAGCAAGATTATAT ATTATCATTAGAACCGAGCTTAAAAGATATTTTGAAAAATGAATTATATACGCCGCAAACGGCAGGTAAGGAGGCTACTC AAGATAAGTATGAGTTAAATGTAAATAAATTGCAAAGTACAGGACGAATATTTGGCAATAATTTAGGTGGAGCCGCAAAT TGGGCCGCTTCTATTATTAAAGGTGCGAGCGGTAATGTGCTTGATATATTAAAAGCTACGGGTTACGGTGTAGTTACGAC CGCATCATTAATTATCGACGGTCTTACTGAAAAGGAAAAAATAGAAATAAAAGCAATATTTAAATTAAATATAAATGAAG AATATAAAAAACAAGATACTCCTATATATAAAAATTTAGAACAATTAGAGAATTATACTAAGAATCAAGTATTGCAAACA TTAGCTTTAAAAAAATTAATAACGGATAAGAATTATTGGAGTATGAATAAAGACCAAACAATACAAAAATTTCGAGAAAT AATAGGCAGTTTTAATTCTGAAATAAAAAGAAACGGTTTAGAAGAATTTTTTAGAGAAAATAAAATAACAATGGATAATA GCAAAGAGAGCTATGTTAAAGATATTAAAAATGTAATGAATCCATTTTATGAAAATCCTAATAAAGCCGAAGGATATAAT CCTTTAACTAAAGCTATGGATAAAGATAAAGTTAATAATGCTGAAATAAAAACGACAAAAAGTGCAAATTTAAAAAGGAT GCAAAAAAGAAAGCGAAATTTAACAATATGA
Upstream 100 bases:
>100_bases TTTATTAGAGTTTATACTATAATTTCAGTTGTAAGAGAAGTTAATTAAATAAATAAAAGAAAAATTTATAAAAATATTTG TTCTTTGGAGAGAAAAATAA
Downstream 100 bases:
>100_bases AATGATTATTATAACTCACTGCTAGTTACAAATTTGTAAGAGGTAGTATCGCTAAATATTCTATGCAATAGTTCATTATT AAGAGCATGGCTAGTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSKKSRVRKIFNKLKSYWTSFRQSKIGKILFSNSLSYAVSIASIAITVSGLFTPISPIIIAVAVVSGVSVGIQAVNETLK VHDLRKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQTAGKEATQDKYELNVNKLQSTGRIFGNNLGGAAN WAASIIKGASGNVLDILKATGYGVVTTASLIIDGLTEKEKIEIKAIFKLNINEEYKKQDTPIYKNLEQLENYTKNQVLQT LALKKLITDKNYWSMNKDQTIQKFREIIGSFNSEIKRNGLEEFFRENKITMDNSKESYVKDIKNVMNPFYENPNKAEGYN PLTKAMDKDKVNNAEIKTTKSANLKRMQKRKRNLTI
Sequences:
>Translated_356_residues MSKKSRVRKIFNKLKSYWTSFRQSKIGKILFSNSLSYAVSIASIAITVSGLFTPISPIIIAVAVVSGVSVGIQAVNETLK VHDLRKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQTAGKEATQDKYELNVNKLQSTGRIFGNNLGGAAN WAASIIKGASGNVLDILKATGYGVVTTASLIIDGLTEKEKIEIKAIFKLNINEEYKKQDTPIYKNLEQLENYTKNQVLQT LALKKLITDKNYWSMNKDQTIQKFREIIGSFNSEIKRNGLEEFFRENKITMDNSKESYVKDIKNVMNPFYENPNKAEGYN PLTKAMDKDKVNNAEIKTTKSANLKRMQKRKRNLTI >Mature_355_residues SKKSRVRKIFNKLKSYWTSFRQSKIGKILFSNSLSYAVSIASIAITVSGLFTPISPIIIAVAVVSGVSVGIQAVNETLKV HDLRKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKNELYTPQTAGKEATQDKYELNVNKLQSTGRIFGNNLGGAANW AASIIKGASGNVLDILKATGYGVVTTASLIIDGLTEKEKIEIKAIFKLNINEEYKKQDTPIYKNLEQLENYTKNQVLQTL ALKKLITDKNYWSMNKDQTIQKFREIIGSFNSEIKRNGLEEFFRENKITMDNSKESYVKDIKNVMNPFYENPNKAEGYNP LTKAMDKDKVNNAEIKTTKSANLKRMQKRKRNLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40293; Mature: 40162
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKSRVRKIFNKLKSYWTSFRQSKIGKILFSNSLSYAVSIASIAITVSGLFTPISPIII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVAVVSGVSVGIQAVNETLKVHDLRKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHH ELYTPQTAGKEATQDKYELNVNKLQSTGRIFGNNLGGAANWAASIIKGASGNVLDILKAT HCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHC GYGVVTTASLIIDGLTEKEKIEIKAIFKLNINEEYKKQDTPIYKNLEQLENYTKNQVLQT CCCHHHHHHHHHHCCCCCHHEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH LALKKLITDKNYWSMNKDQTIQKFREIIGSFNSEIKRNGLEEFFRENKITMDNSKESYVK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DIKNVMNPFYENPNKAEGYNPLTKAMDKDKVNNAEIKTTKSANLKRMQKRKRNLTI HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure SKKSRVRKIFNKLKSYWTSFRQSKIGKILFSNSLSYAVSIASIAITVSGLFTPISPIII CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVAVVSGVSVGIQAVNETLKVHDLRKLHKENNLLVHNRNAKSQQDYILSLEPSLKDILKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHH ELYTPQTAGKEATQDKYELNVNKLQSTGRIFGNNLGGAANWAASIIKGASGNVLDILKAT HCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHC GYGVVTTASLIIDGLTEKEKIEIKAIFKLNINEEYKKQDTPIYKNLEQLENYTKNQVLQT CCCHHHHHHHHHHCCCCCHHEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH LALKKLITDKNYWSMNKDQTIQKFREIIGSFNSEIKRNGLEEFFRENKITMDNSKESYVK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DIKNVMNPFYENPNKAEGYNPLTKAMDKDKVNNAEIKTTKSANLKRMQKRKRNLTI HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA