| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
Click here to switch to the map view.
The map label for this gene is mpp [C]
Identifier: 229586465
GI number: 229586465
Start: 298592
End: 299827
Strand: Direct
Name: mpp [C]
Synonym: RAF_ORF0273
Alternate gene names: 229586465
Gene position: 298592-299827 (Clockwise)
Preceding gene: 229586464
Following gene: 229586466
Centisome position: 23.35
GC content: 31.47
Gene sequence:
>1236_bases ATGGAAAATTTTAATGTTAGTAAATTAAAAAACGGTTTGACAATTTTAACATATAATATGCCTTATGTTAATTCGGTAGC AATAAATTTAATTGCTAAAGTTGGAGCACGTTATGAGAATGCAGAAGAGGATGGCATATCTCACTTTCTTGAGCATATGG CTTTTAAAGGTACAAAAACTAGAACGGCAAAACAGATAGCGGAAGCGTTTGACTCTATAGGCGGACATTTTAATGCCTAT ACCGGTCATGAGAATACGGTATATTATGCGCGAGTCTTGTCTGAAAATTGTGATAAAGCACTTAATATACTTGCCGATAT AATTCAAAATTCTATTTTTTCTGATGAGGAAATAGCTAAGGAATATCAGGTGATCATGCAGGAAATTGCTCATCATCAGG ATAATCCAGATGACCTAGTATATGAGAAATTTTATAATAAAGTTTATAGAGAACAACCGTTGGGTAAGTCAATCTTAGGT ACTGCTAAAACCCTTGCAACTTTTACGAAAGAACATTTTTTTAATTTTATAGATAAACATTATAATGCTGAAAATCTCTA TTTATCAATTGCCGGTAATATTGATCATGATAAAATAGTAATTATAGCGGAACAGTTATTTTCTTCTTTGAAGCAAGGAG TAAAAAGTAGCTTTATTCCGGCAAAATATATAGGCGGAAATGACTTTATTAATAAGGAGTTAGAGCAAACTAGTTTAGTG CTAGGGTTTGAAGGTACATCATATATTAATTTAGAAAAGCTTTACCAAACCCATCTACTTTCTATAATATTCGGTGGCGG TATGTCATCGCGTTTATTTCAAAGTATTCGTGAGAAATTAGGTTTAGCATATGCAGTAGGTAGTTATAATAGTGCTTATT TTGATAGTGGAGTGTTTACAATTTATGCATCCACTGCACATGATAAATTAGAATTATTATATAGAGAGATTAAAAACGAA ATAATAAAAATGACTGAACAAGTAAGCACAGAAGAGATTCTTAGAGCTAAAACACAACTACGTAGTAATTTACAAATGGC TCAAGAGAAAAATACCTATAAGTCAGAAGAAATAGGTAAAAATTATTCTGTTTTCGGTCAATATATTTCTCCTGAAGAGA TTATGGAAATTATCATGAGCATAAAAGCTGATGATATTATTAATACGGCAAATAAAATATTTAGTGGTACTACTACGTCG GCAATTATCGGTCCGAATGATCTTCAGGGATTTTAA
Upstream 100 bases:
>100_bases GAGCGTGGCAATTTCATGAAGTAATATAAAATTCCTGAGATTGCCACGTCGATGCTATGCATTTCCGCGCAATGACGATT TAGAAAATAAAAGATAAATT
Downstream 100 bases:
>100_bases TGATATGCTTGTGTGGATACCAGAGTCGTCATTGCGAGCGGCCGTAGGCTGCGTAGCAATCTCATGAAATAATAACAAGC TCCTGAGATTGCTTCGTCAA
Product: protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQIAEAFDSIGGHFNAY TGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILG TAKTLATFTKEHFFNFIDKHYNAENLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNDFINKELEQTSLV LGFEGTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREKLGLAYAVGSYNSAYFDSGVFTIYASTAHDKLELLYREIKNE IIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTS AIIGPNDLQGF
Sequences:
>Translated_411_residues MENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQIAEAFDSIGGHFNAY TGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILG TAKTLATFTKEHFFNFIDKHYNAENLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNDFINKELEQTSLV LGFEGTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREKLGLAYAVGSYNSAYFDSGVFTIYASTAHDKLELLYREIKNE IIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTS AIIGPNDLQGF >Mature_411_residues MENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQIAEAFDSIGGHFNAY TGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILG TAKTLATFTKEHFFNFIDKHYNAENLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNDFINKELEQTSLV LGFEGTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREKLGLAYAVGSYNSAYFDSGVFTIYASTAHDKLELLYREIKNE IIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTS AIIGPNDLQGF
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=418, Percent_Identity=28.4688995215311, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI46593007, Length=426, Percent_Identity=22.7699530516432, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI24308013, Length=430, Percent_Identity=25.5813953488372, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI50592988, Length=413, Percent_Identity=26.1501210653753, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1787770, Length=219, Percent_Identity=27.3972602739726, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71999683, Length=412, Percent_Identity=29.3689320388349, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17553678, Length=375, Percent_Identity=24.2666666666667, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17510601, Length=447, Percent_Identity=22.3713646532438, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17569737, Length=305, Percent_Identity=21.9672131147541, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323192, Length=404, Percent_Identity=32.9207920792079, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6321813, Length=426, Percent_Identity=25.5868544600939, Blast_Score=143, Evalue=5e-35, Organism=Drosophila melanogaster, GI21357875, Length=411, Percent_Identity=29.683698296837, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24646943, Length=411, Percent_Identity=29.683698296837, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI19921772, Length=437, Percent_Identity=25.1716247139588, Blast_Score=138, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 46397; Mature: 46397
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKT CCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH RTAKQIAEAFDSIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAK HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC YNAENLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNDFINKELEQTSLV CCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHEEE LGFEGTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREKLGLAYAVGSYNSAYFDSGVFT EEECCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCCCCHHCCCCEEE IYASTAHDKLELLYREIKNEIIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGK EEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAIIGPNDLQGF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC >Mature Secondary Structure MENFNVSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKT CCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH RTAKQIAEAFDSIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAK HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC YNAENLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNDFINKELEQTSLV CCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHEEE LGFEGTSYINLEKLYQTHLLSIIFGGGMSSRLFQSIREKLGLAYAVGSYNSAYFDSGVFT EEECCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEECCCCCHHCCCCEEE IYASTAHDKLELLYREIKNEIIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGK EEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAIIGPNDLQGF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]