Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229586463

Identifier: 229586463

GI number: 229586463

Start: 297414

End: 297674

Strand: Direct

Name: 229586463

Synonym: RAF_ORF0271

Alternate gene names: NA

Gene position: 297414-297674 (Clockwise)

Preceding gene: 229586462

Following gene: 229586464

Centisome position: 23.26

GC content: 28.35

Gene sequence:

>261_bases
ATGTATATAATTCGTTATACTATACAAGCACAAAAAGATGCTAAGAAAATAGTGCAAGCCGGTTTAAAGAATAAAGTAGA
AGTTTTATTAAACATAGTTAGTACTGATCCTTGGAAAATTTACCCTCCATATGAAAAGCTCGTTGGTGACTTTAGCGGTT
GCTATTCAAGAAGAATTAATATTCAACATAGGTTGGTTTATGAAGTTTATAAACAAGAAAAAGTTGTAAAAATTCTTAGA
ATGTATACGTATTATGAATAA

Upstream 100 bases:

>100_bases
TATTTATTATCTATTCCAAATATGCATAAGTTTATAATTGAAGGACGAGCAGAGCCTATAGCAAAGTGTAGCGATAAATT
AAATTGGTAATTTTTTATAA

Downstream 100 bases:

>100_bases
GTCATTAACTGAAAAAATCTCAGCATTTATTATTACCAAAAATGAATCCACAAGGGTAGCACGAGCTATAAATAGCGTAA
AAAATATTACTGATGAGGTG

Product: Putative toxin of toxin-antitoxin (TA) system

Products: NA

Alternate protein names: Addiction Module Antitoxin; Txe/YoeB Family Addiction Module xin; Xin Of Toxin-Antitoxin System; Addiction Module xin Txe/YoeB; Cytoplasmic Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR
MYTYYE

Sequences:

>Translated_86_residues
MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR
MYTYYE
>Mature_86_residues
MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRINIQHRLVYEVYKQEKVVKILR
MYTYYE

Specific function: Unknown

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10352; Mature: 10352

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRIN
CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC
IQHRLVYEVYKQEKVVKILRMYTYYE
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYIIRYTIQAQKDAKKIVQAGLKNKVEVLLNIVSTDPWKIYPPYEKLVGDFSGCYSRRIN
CEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC
IQHRLVYEVYKQEKVVKILRMYTYYE
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA