| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586457
Identifier: 229586457
GI number: 229586457
Start: 291728
End: 292120
Strand: Direct
Name: 229586457
Synonym: RAF_ORF0265
Alternate gene names: NA
Gene position: 291728-292120 (Clockwise)
Preceding gene: 229586456
Following gene: 229586459
Centisome position: 22.82
GC content: 33.33
Gene sequence:
>393_bases ATGGTCCGTGACAAGGAAGCAATTTATGAACCTCTGAAAGCTCTTTTAACGCTTGAATCCACATTGCGTAAGAATGATTA CAAGAAAATTAAGGCTATTGACAAGAAAGATTTAGCTGCGTTTGTTCAATGGAAAGCAGCAATATTACCGGTTGTAAAAG ATGTTTCTAAGGATGATTCTATAAAACAACCATTAATAGAATTAGTAGGAAAGATAGCTAAATTGATACCGCCTTTAGAG TTTTTATGCATTTTAAAAATTGAAGATATTATTGATAGTAACGCTACAGATAAGATAGAATTACCTAAGAGTGCAATAAA AGCGATGACAGAGTGCGGACTACTTCAAGTTGAAGCAACAGGAGAAATAGTGGCTCATAATGATTTAGTTTAA
Upstream 100 bases:
>100_bases ACCTAACTAGAGCGCTTAATGATAGTAAGCAGAGTACAGATATGGTAAAAGTATTGTTACAATATGGTGCTAATCGGATA TACTCGATCCTGACGGTCAA
Downstream 100 bases:
>100_bases AGGTTGAGGCTGGTTTTATGTCATTGCTGCTTTTGCAGGAATGACATAAAACATGGGTAATACCTCCTCACACTATTAAC CCTTTAACTTGAGAGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVRDKEAIYEPLKALLTLESTLRKNDYKKIKAIDKKDLAAFVQWKAAILPVVKDVSKDDSIKQPLIELVGKIAKLIPPLE FLCILKIEDIIDSNATDKIELPKSAIKAMTECGLLQVEATGEIVAHNDLV
Sequences:
>Translated_130_residues MVRDKEAIYEPLKALLTLESTLRKNDYKKIKAIDKKDLAAFVQWKAAILPVVKDVSKDDSIKQPLIELVGKIAKLIPPLE FLCILKIEDIIDSNATDKIELPKSAIKAMTECGLLQVEATGEIVAHNDLV >Mature_130_residues MVRDKEAIYEPLKALLTLESTLRKNDYKKIKAIDKKDLAAFVQWKAAILPVVKDVSKDDSIKQPLIELVGKIAKLIPPLE FLCILKIEDIIDSNATDKIELPKSAIKAMTECGLLQVEATGEIVAHNDLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14466; Mature: 14466
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRDKEAIYEPLKALLTLESTLRKNDYKKIKAIDKKDLAAFVQWKAAILPVVKDVSKDDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCH IKQPLIELVGKIAKLIPPLEFLCILKIEDIIDSNATDKIELPKSAIKAMTECGLLQVEAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECC GEIVAHNDLV CCEECCCCCC >Mature Secondary Structure MVRDKEAIYEPLKALLTLESTLRKNDYKKIKAIDKKDLAAFVQWKAAILPVVKDVSKDDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCH IKQPLIELVGKIAKLIPPLEFLCILKIEDIIDSNATDKIELPKSAIKAMTECGLLQVEAT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECC GEIVAHNDLV CCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA