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The map label for this gene is degQ [C]

Identifier: 229586430

GI number: 229586430

Start: 246644

End: 248137

Strand: Direct

Name: degQ [C]

Synonym: RAF_ORF0226

Alternate gene names: 229586430

Gene position: 246644-248137 (Clockwise)

Preceding gene: 229586417

Following gene: 229586432

Centisome position: 19.29

GC content: 32.06

Gene sequence:

>1494_bases
ATGATTTTACAAGAGGTGACAATGAAAAAACTACCGATTTTACTAAAACTTTTATTTATTATTAATTTAGTTTTCCTAAA
TAATATAGTTTTAGCATCTAGCGAAACAAGCACTAGTATATTTGAAAAAGCAAAGAAAGCAATCGTAACGATCGATACTA
GAATTGCCGTATCGGCATATGACGATACAAGTAGTTGGACTGGAACGGGATTTATCAACGATAAGAACAACGGTTATATA
ATTACTAATACTCATGTTGTCGGCGGTGCGTCTATCGGAACTTATTTTGTTACTTTTTATAACGGTGAGCAGGCAGAAGC
AAAACTTATCTATTACGATATTTGGCAAGATTATGCCGTTTTAAAAGTAGAGAGTAAAGATATACCGGCATCAGCAACGC
AAATATCTTTTGCAAGCGAATTGCCAAAATTAAATCAAAAGGTTTTTGTAGTCGGTAACACAGAAGCAAAAGGTTTTTCT
TTCCATACCGGTTATTTGTCTGATCTTTATAATATTGAAGGTTTAATGCCGCAATGTACTTATGTTATTAATTTAAATAC
TACAGGAGGTGCTAGTGGTTCACCGGTATTAAACGATAAGATTGAGGCTATAGGAGTATTATATGGTGGCGGTAAAACTC
ATTCTCTAGCGCTGCACGGTGATTATGTAGCTCGCACTTTAGAAAGTTTAAAGAATAATAAACAACCAGGCAGAAAACAT
ATAGGAATAATAAGCGAGTTATATTCTTTAAATAAAGCAGTGAGACATCACAATTTCCCTAAAGAAGAAATGGATAAATA
TATAAAGAAATTTCCTGATAGTAGAAATAGAGTGATAAGTATTAAGGCAGTTCTAGCCGGATCACCTGCCGCAAAATCTT
TAAAAGCCGGTGATATTATTTGGGCAGTTAATGATAAGGAACTCGGCGGCAATCTAGCATTATTTGATAGAGAAATGGAT
AATTTCAAAGGAATAGCTATTAAACTTACTATATTTCGTGACGGAAAAAAGCTAGAACAAGCAGTAGATTTATATGATGT
GAACAATAATAAAATCGCTAAAATGATAAATTTCGGCGGTGCAGTATTTTTTGAAGCCGATGATTATTTTAGTAATAAAT
CAGGTATTCCTCTTAAAGCTCTAAGTATAGCTTCCGTTCAATCTGGTAGTAGCTTTAGCTCTATACCAACGTTTTTTACT
AAAGATTATAAAAATGTTTATAGATTGCAAATTTTTGAGATGAAAGATTTAGCTTTAAGTAATCTTGATGATTTGGTGAA
ATTCTTGCCTGCTATTACTAAAGAGAAGTTTATAACGGTTAGATTTAGAAATTATCAACCTTATTATGCTAATTTCGGTT
ATAATGAATTTATCTCGTCGCATGATGATATGATTGCTGATGTAACTCTAGATTCTATAGATACTAAGCCTTATATATTA
AAGTATAATACTATTTCTCATGATTGGGATATGGAAAATATAAAACTTCAGTAA

Upstream 100 bases:

>100_bases
TGGTAGTCCCAAGGTCGATACCTATTACTTTTCCCATAAGATTCCTCGTTTTCTTTTTTTTATTTTATTATGACTTTTGA
TTTGATATAGTGCGGCTTAA

Downstream 100 bases:

>100_bases
CTAATGACATTGTGATAAATTAACAATTCTTAATCGATGAAGTAATATATAATTCAACTTGGTTTGTTGCGTTATTATTC
TTAAATTTATAATCTTATAT

Product: Heat shock protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MILQEVTMKKLPILLKLLFIINLVFLNNIVLASSETSTSIFEKAKKAIVTIDTRIAVSAYDDTSSWTGTGFINDKNNGYI
ITNTHVVGGASIGTYFVTFYNGEQAEAKLIYYDIWQDYAVLKVESKDIPASATQISFASELPKLNQKVFVVGNTEAKGFS
FHTGYLSDLYNIEGLMPQCTYVINLNTTGGASGSPVLNDKIEAIGVLYGGGKTHSLALHGDYVARTLESLKNNKQPGRKH
IGIISELYSLNKAVRHHNFPKEEMDKYIKKFPDSRNRVISIKAVLAGSPAAKSLKAGDIIWAVNDKELGGNLALFDREMD
NFKGIAIKLTIFRDGKKLEQAVDLYDVNNNKIAKMINFGGAVFFEADDYFSNKSGIPLKALSIASVQSGSSFSSIPTFFT
KDYKNVYRLQIFEMKDLALSNLDDLVKFLPAITKEKFITVRFRNYQPYYANFGYNEFISSHDDMIADVTLDSIDTKPYIL
KYNTISHDWDMENIKLQ

Sequences:

>Translated_497_residues
MILQEVTMKKLPILLKLLFIINLVFLNNIVLASSETSTSIFEKAKKAIVTIDTRIAVSAYDDTSSWTGTGFINDKNNGYI
ITNTHVVGGASIGTYFVTFYNGEQAEAKLIYYDIWQDYAVLKVESKDIPASATQISFASELPKLNQKVFVVGNTEAKGFS
FHTGYLSDLYNIEGLMPQCTYVINLNTTGGASGSPVLNDKIEAIGVLYGGGKTHSLALHGDYVARTLESLKNNKQPGRKH
IGIISELYSLNKAVRHHNFPKEEMDKYIKKFPDSRNRVISIKAVLAGSPAAKSLKAGDIIWAVNDKELGGNLALFDREMD
NFKGIAIKLTIFRDGKKLEQAVDLYDVNNNKIAKMINFGGAVFFEADDYFSNKSGIPLKALSIASVQSGSSFSSIPTFFT
KDYKNVYRLQIFEMKDLALSNLDDLVKFLPAITKEKFITVRFRNYQPYYANFGYNEFISSHDDMIADVTLDSIDTKPYIL
KYNTISHDWDMENIKLQ
>Mature_497_residues
MILQEVTMKKLPILLKLLFIINLVFLNNIVLASSETSTSIFEKAKKAIVTIDTRIAVSAYDDTSSWTGTGFINDKNNGYI
ITNTHVVGGASIGTYFVTFYNGEQAEAKLIYYDIWQDYAVLKVESKDIPASATQISFASELPKLNQKVFVVGNTEAKGFS
FHTGYLSDLYNIEGLMPQCTYVINLNTTGGASGSPVLNDKIEAIGVLYGGGKTHSLALHGDYVARTLESLKNNKQPGRKH
IGIISELYSLNKAVRHHNFPKEEMDKYIKKFPDSRNRVISIKAVLAGSPAAKSLKAGDIIWAVNDKELGGNLALFDREMD
NFKGIAIKLTIFRDGKKLEQAVDLYDVNNNKIAKMINFGGAVFFEADDYFSNKSGIPLKALSIASVQSGSSFSSIPTFFT
KDYKNVYRLQIFEMKDLALSNLDDLVKFLPAITKEKFITVRFRNYQPYYANFGYNEFISSHDDMIADVTLDSIDTKPYIL
KYNTISHDWDMENIKLQ

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324206, Length=452, Percent_Identity=25.2212389380531, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.-

Molecular weight: Translated: 55560; Mature: 55560

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQEVTMKKLPILLKLLFIINLVFLNNIVLASSETSTSIFEKAKKAIVTIDTRIAVSAY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCEEEEEEEEEEEEEE
DDTSSWTGTGFINDKNNGYIITNTHVVGGASIGTYFVTFYNGEQAEAKLIYYDIWQDYAV
CCCCCCEEEEEEECCCCCEEEEECEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCEEE
LKVESKDIPASATQISFASELPKLNQKVFVVGNTEAKGFSFHTGYLSDLYNIEGLMPQCT
EEEECCCCCCCHHEEHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCCCEE
YVINLNTTGGASGSPVLNDKIEAIGVLYGGGKTHSLALHGDYVARTLESLKNNKQPGRKH
EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHHHHHCCCCCCHHH
IGIISELYSLNKAVRHHNFPKEEMDKYIKKFPDSRNRVISIKAVLAGSPAAKSLKAGDII
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEE
WAVNDKELGGNLALFDREMDNFKGIAIKLTIFRDGKKLEQAVDLYDVNNNKIAKMINFGG
EEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHEEECCCCCEEEEEECCC
AVFFEADDYFSNKSGIPLKALSIASVQSGSSFSSIPTFFTKDYKNVYRLQIFEMKDLALS
EEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEHHHHHC
NLDDLVKFLPAITKEKFITVRFRNYQPYYANFGYNEFISSHDDMIADVTLDSIDTKPYIL
CHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCHHHHHCCCCCEEEEEEECCCCCCCEEE
KYNTISHDWDMENIKLQ
EEECCCCCCCCCCCEEC
>Mature Secondary Structure
MILQEVTMKKLPILLKLLFIINLVFLNNIVLASSETSTSIFEKAKKAIVTIDTRIAVSAY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCEEEEEEEEEEEEEE
DDTSSWTGTGFINDKNNGYIITNTHVVGGASIGTYFVTFYNGEQAEAKLIYYDIWQDYAV
CCCCCCEEEEEEECCCCCEEEEECEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCEEE
LKVESKDIPASATQISFASELPKLNQKVFVVGNTEAKGFSFHTGYLSDLYNIEGLMPQCT
EEEECCCCCCCHHEEHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHCCCCCCCEE
YVINLNTTGGASGSPVLNDKIEAIGVLYGGGKTHSLALHGDYVARTLESLKNNKQPGRKH
EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHHHHHCCCCCCHHH
IGIISELYSLNKAVRHHNFPKEEMDKYIKKFPDSRNRVISIKAVLAGSPAAKSLKAGDII
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEE
WAVNDKELGGNLALFDREMDNFKGIAIKLTIFRDGKKLEQAVDLYDVNNNKIAKMINFGG
EEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHEEECCCCCEEEEEECCC
AVFFEADDYFSNKSGIPLKALSIASVQSGSSFSSIPTFFTKDYKNVYRLQIFEMKDLALS
EEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEHHHHHC
NLDDLVKFLPAITKEKFITVRFRNYQPYYANFGYNEFISSHDDMIADVTLDSIDTKPYIL
CHHHHHHHHHHHCCCEEEEEEEECCCCEEECCCHHHHHCCCCCEEEEEEECCCCCCCEEE
KYNTISHDWDMENIKLQ
EEECCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]