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The map label for this gene is 229586417

Identifier: 229586417

GI number: 229586417

Start: 230735

End: 231121

Strand: Direct

Name: 229586417

Synonym: RAF_ORF0213

Alternate gene names: NA

Gene position: 230735-231121 (Clockwise)

Preceding gene: 229586416

Following gene: 229586430

Centisome position: 18.05

GC content: 31.52

Gene sequence:

>387_bases
TTGGGCTGGACTCCTTTAGATTATGCTATATCGAATAATAATATAAAAATTGCCGATTTTTTATTAAAGTGTGGTGCACC
TATGAATTTAATCCATATAAATATAGGATTTATGAAGCCGGAAATTGCCAAACTTTTAATTAATCAGGGAATGAGTCCTA
ATTTAAGATATGAAGACGGTATTACCGGAATGATGCTAGCCGCAGAAAGAAATAATCTTGATTTAATAAAACTTTTGCTT
ACGTTAGGTGTTAATCCTAATGTTCAAAATTCTAAAACCGGAATGACTTCCCTTACATCATCATATCTTAATGTTGAACC
TACTCGTATTTTATTAGAATATGGAGCGGATCAAAAAATTAAAGATTGCAAAGGGAAAAGAGCTTGA

Upstream 100 bases:

>100_bases
TCGAAAATCCAATTACACCGATAGCAAATGCTATTAAAGCGGATAATATTGATGAAGTAAAAAAATATTAGATTAGGGAT
ATGGAGTAAATCAACCATAC

Downstream 100 bases:

>100_bases
GATTAGATAGCGGTGGATGCTAATAGAACTTTACATGCTTCTGACGTAGAATACTATACTGCTTTATTTGTTGTTCCATT
TAAAACTAAACTGAAAATTA

Product: Ankyrin repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGWTPLDYAISNNNIKIADFLLKCGAPMNLIHINIGFMKPEIAKLLINQGMSPNLRYEDGITGMMLAAERNNLDLIKLLL
TLGVNPNVQNSKTGMTSLTSSYLNVEPTRILLEYGADQKIKDCKGKRA

Sequences:

>Translated_128_residues
MGWTPLDYAISNNNIKIADFLLKCGAPMNLIHINIGFMKPEIAKLLINQGMSPNLRYEDGITGMMLAAERNNLDLIKLLL
TLGVNPNVQNSKTGMTSLTSSYLNVEPTRILLEYGADQKIKDCKGKRA
>Mature_127_residues
GWTPLDYAISNNNIKIADFLLKCGAPMNLIHINIGFMKPEIAKLLINQGMSPNLRYEDGITGMMLAAERNNLDLIKLLLT
LGVNPNVQNSKTGMTSLTSSYLNVEPTRILLEYGADQKIKDCKGKRA

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 ANK repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 14168; Mature: 14037

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWTPLDYAISNNNIKIADFLLKCGAPMNLIHINIGFMKPEIAKLLINQGMSPNLRYEDG
CCCCCCCEEEECCCEEHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEECCC
ITGMMLAAERNNLDLIKLLLTLGVNPNVQNSKTGMTSLTSSYLNVEPTRILLEYGADQKI
CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC
KDCKGKRA
CCCCCCCC
>Mature Secondary Structure 
GWTPLDYAISNNNIKIADFLLKCGAPMNLIHINIGFMKPEIAKLLINQGMSPNLRYEDG
CCCCCCEEEECCCEEHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCEECCC
ITGMMLAAERNNLDLIKLLLTLGVNPNVQNSKTGMTSLTSSYLNVEPTRILLEYGADQKI
CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHEEEEECCCCCCC
KDCKGKRA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA