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The map label for this gene is yqiY [H]

Identifier: 229586369

GI number: 229586369

Start: 171382

End: 172038

Strand: Direct

Name: yqiY [H]

Synonym: RAF_ORF0160

Alternate gene names: 229586369

Gene position: 171382-172038 (Clockwise)

Preceding gene: 229586368

Following gene: 229586370

Centisome position: 13.4

GC content: 30.44

Gene sequence:

>657_bases
ATGTTTGAGTATTTAATAAAATTCTATCCAAAAATCTTTTTTATTGTAGAGGGAACTTTGGTAACTTTAAAATATAGCGT
TATTGCCGTTATATTCGGTTTAGTAATAGGGATGCTGCTCGCTATTTGTAAGGTAAATAAAAATCGTGCTTTAAGGCTTT
TTGCAAATTTCTATACTTCTATTTTCAGAGGAACGCCTTTATTAATTCAATTAAGTATTATTTATTTTGCTTCACCTTAT
ATCATAGGCATTAAATTTAGTGTGTTTATGGCGGGAGCTATTGCTTTTTCTCTTAATTCGGGAGCATATGTTTCCGAAGT
AATCAGGGCAGGGATTAATGCAGTTGATAAAGGGCAGTTTGAAGCGGCTGAAGCTCTTGCTATTCCAAAGTTTTTAATAA
CGAAAGATATAATTCTGCCGCAAGCAGTTAAAAATATTTTTCCGTCATTAGTAAATGAGCTTGTAAATTTGATTAAAGAA
TCAGCCATTATTTCTATGCTTGGAGAAATGGATTTAATGCGTAGAGCACAAATTGTATCAATTGAAACATATAATTATTT
TTTTCCAATGCTTATTGCTGCGTGCTGTTACTATATTTTAGTGATGTTAATCAGCTTTATAGCAAAAATAATTGAGAAAA
AAATGATTGTTAATTAA

Upstream 100 bases:

>100_bases
TAATGTTATCCCGCGATTAAATCGCGGGATCCAAAAATGCTTATTTTTTAGATATCGCGGTCAAGCCGCGGTATGACAGA
AAAAAAAATATATATAAAAT

Downstream 100 bases:

>100_bases
AACATACTTGCTTTTATGGAAAAAGTAATTATAATTTAAATTTAGTGTAGTTTACAAATTCTTATAATTTGTATTTAGAA
ATGATTGAAAATAAAGGGTG

Product: Amino acid ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPY
IIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKE
SAIISMLGEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIVN

Sequences:

>Translated_218_residues
MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPY
IIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKE
SAIISMLGEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIVN
>Mature_218_residues
MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPY
IIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKE
SAIISMLGEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIVN

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=202, Percent_Identity=34.1584158415842, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=29.3269230769231, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=28.7735849056604, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787087, Length=231, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=29.3838862559242, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=28.5046728971963, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=25.2336448598131, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787086, Length=226, Percent_Identity=27.8761061946903, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=27.3148148148148, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI48994930, Length=165, Percent_Identity=29.0909090909091, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24492; Mature: 24492

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTS
CHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IFRGTPLLIQLSIIYFASPYIIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQF
HHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCH
EAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIVN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTS
CHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IFRGTPLLIQLSIIYFASPYIIGIKFSVFMAGAIAFSLNSGAYVSEVIRAGINAVDKGQF
HHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCH
EAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIVN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA