| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828867
Identifier: 227828867
GI number: 227828867
Start: 2459523
End: 2461508
Strand: Direct
Name: 227828867
Synonym: M1425_2640
Alternate gene names: NA
Gene position: 2459523-2461508 (Clockwise)
Preceding gene: 227828865
Following gene: 227828871
Centisome position: 94.28
GC content: 34.69
Gene sequence:
>1986_bases ATGCATACCTATATAAATAGAAGTGTAAATAAAAAATTAGTGATGAAGATAGAGAAGTATTTTGGTGTACCTTTAGGTGG AATAGGGACAGGGAAGATAAACTTCTACCCAGATCTTACGATTGATGATATAACTATTCTAAACAACTGGTCAAATCCAC TTAGAAGAATAAGGGGTTTTCACATATTAACATTTCTAGATGGGGAACCTATTTTTCTTCAAACTAATCCTGGAAAAAAC GTGGAAACACCCCCTCGATATACTTACATTAAGGATATGGAGATGTCGGTAGAGTTCCCAGTTATTAAGTATTCAACGCC TTTTGCTGAAATAGAAGTATATTCAATTTTAAGGAAAAATGATATTAAGAATTCTTCTCTCCCAGCATTAAAGTTTAAAA TAAAAGGAAAAGGAAGATTTGCAATTTCTTATCCAAATATAGTTGGTAGTAAGAGAGCTGGAAGAACAAATGAGGGCTAT AAGGGAAAGTTAAATGGTGTTATAATGAGAAATGAAAAAGCCTTAAACTCCGATCCTGCTTATGGAGAAATTTTCTTGGG ATGTGTTGGCTGTAAGGTTATAACAAATTTCGCCTACTATAAGCCAGCTAAGGTTGGAATGACTGAAGATATCACCTATT TTTATAATTTGGAAGAATATGATGAAAAATATATAATAAGACCTTATGCTAGAGAGGAAATAGGGGGTATCATATATAAA GATGTGAATGAAGAAGAAACGTTTATCCTTTCATGGTTTTTCAACGGAAGACCTCATCATTATCCATATGGGCATTACTA CGAGAACTTCTTTAAAGATTCGATAGATGTTGCAGAATACACTCTTAAGTTAGGACCAGATTTAGGTATAGAGGAAAAAG TAGAGTGGCTAAAGGAAGCTTTGGTAAATAGTTTGTACATCCTAACCTCAAATACTTGGTTAACTAAAGATGGCAGATTT GCCGTATATGAAGATCCTTACATTAGTAAATTAATGAACACTATTGGTTCTATGACCTTTGACGGCCTCGGATTTACCCT TTTAGAGCTTTATAGAGATTTAGTGATATCAGCCGACAATCATTTAGTGAACTATATAAATAATGGGGAAGCACCCCATG ATATCGGAGAGGAAAGTATTGAAGATCCAATTTACGGTGCGTCATATCCATATTGGTGGACTGACTTGGGACCAACCTTA GTCTTAATGCTATACAGAGACTATGTATTTACTTCTGATAGGGGAATTTTAGAGAAAAATTATAATAAAATAAAGGAGAT AATTGATTGGCTCATAAGAAAGGATATGGATAACGATTGTATACCTGACTCAAAGGGTGGTTACGACAATTCTTATGATG GAACTCATATGTATGGAGCCTCATCCTATGTTGCATCAATGTTCCTTTCAGCACTAGCTGCATTTATTAAAATATCTGAA ATACTAGACGTTAAGATTGACACTAAATATTATAGATTTTTAGAGTGTGGCAAGAAGACATTTAACTCATTATGGAATGG AAAATATTTCGTTTTGTGGAAGAAGAACGATGAGGAAAACAGATCATGCCTAAACTCACAATTACTAGGTCAATTCTGGT GTGATATTTTGGGATTACCGCCTATTACTGATAATGATAAGATAAACACAGCTTTGAGAAGTATTTATGAGCTGAACTTT AGAGCTTCTAAATACTGTTTAACCAATGCAGTGAAGGAAGATAGAGACATAGATACTTCAACAGGTCAACTTAGATCATG TTGGCCTAGAGTTTCCTTTGCAGTAGCGGCACATATGATATTAAGGGGTATGGTTAAGGAGGGAATGGAAGTAGCGAAAA GGGAATGGGAAACGGTTAAGGAGCTCAACCCTTTTGATCAATTTTCTAGAATAGACGCAATAGAAGGAAAGTATGTAGGG TTAATGTCATATATAGGAAGTACTTCGGTTTGGCTAGTGAAATTAGCTTTGGATAAGCTACGTTAA
Upstream 100 bases:
>100_bases CAAGCTCTAATTTTTCTTCGTTTGAGGTAAGGTATATTTTCTCTATGCCTTCATAATCATATCCATTAAAATCCAGAAAA ATTTCGTACTTCTCCACGTT
Downstream 100 bases:
>100_bases AAAATATTCAATAATAATGTATGAATATTATGATGGATTTGTACAATATCAGTGAATAATCCTTAGTTTTTATAATTATT TTTTAAAAATTGAGAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MHTYINRSVNKKLVMKIEKYFGVPLGGIGTGKINFYPDLTIDDITILNNWSNPLRRIRGFHILTFLDGEPIFLQTNPGKN VETPPRYTYIKDMEMSVEFPVIKYSTPFAEIEVYSILRKNDIKNSSLPALKFKIKGKGRFAISYPNIVGSKRAGRTNEGY KGKLNGVIMRNEKALNSDPAYGEIFLGCVGCKVITNFAYYKPAKVGMTEDITYFYNLEEYDEKYIIRPYAREEIGGIIYK DVNEEETFILSWFFNGRPHHYPYGHYYENFFKDSIDVAEYTLKLGPDLGIEEKVEWLKEALVNSLYILTSNTWLTKDGRF AVYEDPYISKLMNTIGSMTFDGLGFTLLELYRDLVISADNHLVNYINNGEAPHDIGEESIEDPIYGASYPYWWTDLGPTL VLMLYRDYVFTSDRGILEKNYNKIKEIIDWLIRKDMDNDCIPDSKGGYDNSYDGTHMYGASSYVASMFLSALAAFIKISE ILDVKIDTKYYRFLECGKKTFNSLWNGKYFVLWKKNDEENRSCLNSQLLGQFWCDILGLPPITDNDKINTALRSIYELNF RASKYCLTNAVKEDRDIDTSTGQLRSCWPRVSFAVAAHMILRGMVKEGMEVAKREWETVKELNPFDQFSRIDAIEGKYVG LMSYIGSTSVWLVKLALDKLR
Sequences:
>Translated_661_residues MHTYINRSVNKKLVMKIEKYFGVPLGGIGTGKINFYPDLTIDDITILNNWSNPLRRIRGFHILTFLDGEPIFLQTNPGKN VETPPRYTYIKDMEMSVEFPVIKYSTPFAEIEVYSILRKNDIKNSSLPALKFKIKGKGRFAISYPNIVGSKRAGRTNEGY KGKLNGVIMRNEKALNSDPAYGEIFLGCVGCKVITNFAYYKPAKVGMTEDITYFYNLEEYDEKYIIRPYAREEIGGIIYK DVNEEETFILSWFFNGRPHHYPYGHYYENFFKDSIDVAEYTLKLGPDLGIEEKVEWLKEALVNSLYILTSNTWLTKDGRF AVYEDPYISKLMNTIGSMTFDGLGFTLLELYRDLVISADNHLVNYINNGEAPHDIGEESIEDPIYGASYPYWWTDLGPTL VLMLYRDYVFTSDRGILEKNYNKIKEIIDWLIRKDMDNDCIPDSKGGYDNSYDGTHMYGASSYVASMFLSALAAFIKISE ILDVKIDTKYYRFLECGKKTFNSLWNGKYFVLWKKNDEENRSCLNSQLLGQFWCDILGLPPITDNDKINTALRSIYELNF RASKYCLTNAVKEDRDIDTSTGQLRSCWPRVSFAVAAHMILRGMVKEGMEVAKREWETVKELNPFDQFSRIDAIEGKYVG LMSYIGSTSVWLVKLALDKLR >Mature_661_residues MHTYINRSVNKKLVMKIEKYFGVPLGGIGTGKINFYPDLTIDDITILNNWSNPLRRIRGFHILTFLDGEPIFLQTNPGKN VETPPRYTYIKDMEMSVEFPVIKYSTPFAEIEVYSILRKNDIKNSSLPALKFKIKGKGRFAISYPNIVGSKRAGRTNEGY KGKLNGVIMRNEKALNSDPAYGEIFLGCVGCKVITNFAYYKPAKVGMTEDITYFYNLEEYDEKYIIRPYAREEIGGIIYK DVNEEETFILSWFFNGRPHHYPYGHYYENFFKDSIDVAEYTLKLGPDLGIEEKVEWLKEALVNSLYILTSNTWLTKDGRF AVYEDPYISKLMNTIGSMTFDGLGFTLLELYRDLVISADNHLVNYINNGEAPHDIGEESIEDPIYGASYPYWWTDLGPTL VLMLYRDYVFTSDRGILEKNYNKIKEIIDWLIRKDMDNDCIPDSKGGYDNSYDGTHMYGASSYVASMFLSALAAFIKISE ILDVKIDTKYYRFLECGKKTFNSLWNGKYFVLWKKNDEENRSCLNSQLLGQFWCDILGLPPITDNDKINTALRSIYELNF RASKYCLTNAVKEDRDIDTSTGQLRSCWPRVSFAVAAHMILRGMVKEGMEVAKREWETVKELNPFDQFSRIDAIEGKYVG LMSYIGSTSVWLVKLALDKLR
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24308251, Length=263, Percent_Identity=27.7566539923954, Blast_Score=105, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71992731, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71992715, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71992723, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17562976, Length=385, Percent_Identity=25.1948051948052, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI45552032, Length=261, Percent_Identity=29.1187739463602, Blast_Score=95, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76186; Mature: 76186
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTYINRSVNKKLVMKIEKYFGVPLGGIGTGKINFYPDLTIDDITILNNWSNPLRRIRGF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCE HILTFLDGEPIFLQTNPGKNVETPPRYTYIKDMEMSVEFPVIKYSTPFAEIEVYSILRKN EEEEEECCCEEEEECCCCCCCCCCCCEEEEECCEEEEECCEEEECCCHHHHHHHHHHHHC DIKNSSLPALKFKIKGKGRFAISYPNIVGSKRAGRTNEGYKGKLNGVIMRNEKALNSDPA CCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC YGEIFLGCVGCKVITNFAYYKPAKVGMTEDITYFYNLEEYDEKYIIRPYAREEIGGIIYK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCEEECCCHHHHHCCEEEE DVNEEETFILSWFFNGRPHHYPYGHYYENFFKDSIDVAEYTLKLGPDLGIEEKVEWLKEA CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHH LVNSLYILTSNTWLTKDGRFAVYEDPYISKLMNTIGSMTFDGLGFTLLELYRDLVISADN HHHEEEEEECCEEEECCCCEEEECCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCC HLVNYINNGEAPHDIGEESIEDPIYGASYPYWWTDLGPTLVLMLYRDYVFTSDRGILEKN CEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHEECCCCHHHHH YNKIKEIIDWLIRKDMDNDCIPDSKGGYDNSYDGTHMYGASSYVASMFLSALAAFIKISE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH ILDVKIDTKYYRFLECGKKTFNSLWNGKYFVLWKKNDEENRSCLNSQLLGQFWCDILGLP HHEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC PITDNDKINTALRSIYELNFRASKYCLTNAVKEDRDIDTSTGQLRSCWPRVSFAVAAHMI CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LRGMVKEGMEVAKREWETVKELNPFDQFSRIDAIEGKYVGLMSYIGSTSVWLVKLALDKL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHC R C >Mature Secondary Structure MHTYINRSVNKKLVMKIEKYFGVPLGGIGTGKINFYPDLTIDDITILNNWSNPLRRIRGF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHCCE HILTFLDGEPIFLQTNPGKNVETPPRYTYIKDMEMSVEFPVIKYSTPFAEIEVYSILRKN EEEEEECCCEEEEECCCCCCCCCCCCEEEEECCEEEEECCEEEECCCHHHHHHHHHHHHC DIKNSSLPALKFKIKGKGRFAISYPNIVGSKRAGRTNEGYKGKLNGVIMRNEKALNSDPA CCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC YGEIFLGCVGCKVITNFAYYKPAKVGMTEDITYFYNLEEYDEKYIIRPYAREEIGGIIYK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCCCEEECCCHHHHHCCEEEE DVNEEETFILSWFFNGRPHHYPYGHYYENFFKDSIDVAEYTLKLGPDLGIEEKVEWLKEA CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHH LVNSLYILTSNTWLTKDGRFAVYEDPYISKLMNTIGSMTFDGLGFTLLELYRDLVISADN HHHEEEEEECCEEEECCCCEEEECCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCC HLVNYINNGEAPHDIGEESIEDPIYGASYPYWWTDLGPTLVLMLYRDYVFTSDRGILEKN CEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHEECCCCHHHHH YNKIKEIIDWLIRKDMDNDCIPDSKGGYDNSYDGTHMYGASSYVASMFLSALAAFIKISE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH ILDVKIDTKYYRFLECGKKTFNSLWNGKYFVLWKKNDEENRSCLNSQLLGQFWCDILGLP HHEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC PITDNDKINTALRSIYELNFRASKYCLTNAVKEDRDIDTSTGQLRSCWPRVSFAVAAHMI CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LRGMVKEGMEVAKREWETVKELNPFDQFSRIDAIEGKYVGLMSYIGSTSVWLVKLALDKL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA