| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828797
Identifier: 227828797
GI number: 227828797
Start: 2390318
End: 2392072
Strand: Direct
Name: 227828797
Synonym: M1425_2571
Alternate gene names: NA
Gene position: 2390318-2392072 (Clockwise)
Preceding gene: 227828795
Following gene: 227828798
Centisome position: 91.62
GC content: 35.67
Gene sequence:
>1755_bases GTGATAAGATACTACGAATTTCTTTCCAATGGCATTACGTCAGCTTTAATAAAAAACGGTAGCGTTGAATGGTTACCATT ACCTAAATTTGATTCTTCATCAATTTTCACAAGAATTTTGGATGAAGAAAGAGGAGGATATTTCAGTATAAGGCCAGCAG ATGAAAAATACGACATAATCCATGAGGATTATGTTGAAAATACATTGATTTTAAGGACTGCATTCAAAAGTGAGAAAGGT AAGGCTGAAATATTAGACTTCTTACCCTTATCATTATCGGGAATTATACGAATATATGAGAGTGAAATAGATTTAAAAGT AGATATAAAGCCATTTTTTGAATATGGCCTTGTAACACCAGCTATAATTAAAGCTAGAAGGGGCTTAATATTTAGAAATC CTAAATCTAAAGAAGGTATAGAAATACTGATAGGAGGTGAATATGTACCCCTTGACAATACTGAGTTCACGTTGAAGAAA GGTAAAGGTTATATATACTTACTTTACTCCAAGGATTTACGATATGGTCTATTCAGTAATAAGGGCTTTGTCTATTCCGA ACCATATGAAGCCTTAAACAAGGCTATAAAATATTGGAAAGGAAGGTTAGAGAACGCTAAAAAGGTTAACATATATAGGG ACGCGTATTATAGGTCATTACTGGTACTTCTTGGCTTAATTTATGAACCGTCTGGAGGAATTATAGCAGCTCCAACTACT TCTCTTCCAGAGATAATTGGTGGGTCAAGAAATTGGGATTATAGATATGTTTGGATTAGAGATGCGTCATATTCAGCTGA AGCATTAATAAAGGCAGGATTGCTAGTAAAGGCTAGGGATATAATAAGCTTTCTAACTGCAATGGTAGATCCATCATCTA AGAGTTTTGATCATCCGCTTTACACAATAGATGGAACTGCACCACCTGCAGAGGAAATTCTGGATTGGCTCGAGGGCCAT AAGAAATCGTTTCCAGTTAGAGTTGGAAATGCAGCTTATATGCAAATACAAATGGACGTTGAAGGTGCCTATATGAATGC ATTATATGAATATTACAATACCAGTAAAGATTCGAAATATGTTAACGAAATATGGTGGGCTATAGAGGCAATAGCTGAAT GGACCAAGAAGAGTTGGAAATGGAAAAGTACTGATTTATGGGAGCAAAGAGGGGTAGAGGAACATTTCACACATACTAAA GTTATGAATTGGGTAGCACTTGATAGGGCTAGTAAACTCGCAAAGGAATTAGGATATAAGAACGAGGCTGAGGAGTGGAT TAGTATCGCTGAAGAAATTAGAAAGGACGTTCTTGATAATGGATACTCAGAAAAACTTGGTTACTTTACGAGGTATTACG GAAGTGATTCAGTGGATTCTGCATTGCTTACCTTACCATTATACGACTTTATAGATGCTAAAGATCCTAGATTTTTAAAG ACACATGAAAAAATCGAGAAAGATTTAATGATTTCAGATGGTTTTTTATTAAGATATAAGGATGACTTTATGGGGAGTGC GAAGCATCCTTTTACCTTAGTATCGACATGGCTAACCAGGGTTTATATTAGATTAGGAGAAATAGGCAAGGCAAAAAAAG TAATTGAGAAACTAATAAGCTGTTCTACATCATCATTATTACTTGCTGAACACCTAGATCAAAATACTTGTGAACCTAGA GGGAACTTTCCTCAAGCGTTTCCCCATGCAGGATTAGTAATGGCCATAGTAGAACTAGAGGAGAGGCTAGTTTAA
Upstream 100 bases:
>100_bases TGTTATTAGCGAATGAAAATTTGCTAATGTTTTACCATTAGACATTCAACTATTAACACTTAAGACTAAAATTTTTTAGG ACAAACTCTCTACTATTCGC
Downstream 100 bases:
>100_bases TGAATAGATTACAACAACTTTTGAAGGAGGCTTTAGATGAGATTGAAATTTATGGATCTTGGACTTCCCTTTATTATATT TTGAAGTCGGTAGCTGAAAG
Product: glycoside hydrolase 15-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MIRYYEFLSNGITSALIKNGSVEWLPLPKFDSSSIFTRILDEERGGYFSIRPADEKYDIIHEDYVENTLILRTAFKSEKG KAEILDFLPLSLSGIIRIYESEIDLKVDIKPFFEYGLVTPAIIKARRGLIFRNPKSKEGIEILIGGEYVPLDNTEFTLKK GKGYIYLLYSKDLRYGLFSNKGFVYSEPYEALNKAIKYWKGRLENAKKVNIYRDAYYRSLLVLLGLIYEPSGGIIAAPTT SLPEIIGGSRNWDYRYVWIRDASYSAEALIKAGLLVKARDIISFLTAMVDPSSKSFDHPLYTIDGTAPPAEEILDWLEGH KKSFPVRVGNAAYMQIQMDVEGAYMNALYEYYNTSKDSKYVNEIWWAIEAIAEWTKKSWKWKSTDLWEQRGVEEHFTHTK VMNWVALDRASKLAKELGYKNEAEEWISIAEEIRKDVLDNGYSEKLGYFTRYYGSDSVDSALLTLPLYDFIDAKDPRFLK THEKIEKDLMISDGFLLRYKDDFMGSAKHPFTLVSTWLTRVYIRLGEIGKAKKVIEKLISCSTSSLLLAEHLDQNTCEPR GNFPQAFPHAGLVMAIVELEERLV
Sequences:
>Translated_584_residues MIRYYEFLSNGITSALIKNGSVEWLPLPKFDSSSIFTRILDEERGGYFSIRPADEKYDIIHEDYVENTLILRTAFKSEKG KAEILDFLPLSLSGIIRIYESEIDLKVDIKPFFEYGLVTPAIIKARRGLIFRNPKSKEGIEILIGGEYVPLDNTEFTLKK GKGYIYLLYSKDLRYGLFSNKGFVYSEPYEALNKAIKYWKGRLENAKKVNIYRDAYYRSLLVLLGLIYEPSGGIIAAPTT SLPEIIGGSRNWDYRYVWIRDASYSAEALIKAGLLVKARDIISFLTAMVDPSSKSFDHPLYTIDGTAPPAEEILDWLEGH KKSFPVRVGNAAYMQIQMDVEGAYMNALYEYYNTSKDSKYVNEIWWAIEAIAEWTKKSWKWKSTDLWEQRGVEEHFTHTK VMNWVALDRASKLAKELGYKNEAEEWISIAEEIRKDVLDNGYSEKLGYFTRYYGSDSVDSALLTLPLYDFIDAKDPRFLK THEKIEKDLMISDGFLLRYKDDFMGSAKHPFTLVSTWLTRVYIRLGEIGKAKKVIEKLISCSTSSLLLAEHLDQNTCEPR GNFPQAFPHAGLVMAIVELEERLV >Mature_584_residues MIRYYEFLSNGITSALIKNGSVEWLPLPKFDSSSIFTRILDEERGGYFSIRPADEKYDIIHEDYVENTLILRTAFKSEKG KAEILDFLPLSLSGIIRIYESEIDLKVDIKPFFEYGLVTPAIIKARRGLIFRNPKSKEGIEILIGGEYVPLDNTEFTLKK GKGYIYLLYSKDLRYGLFSNKGFVYSEPYEALNKAIKYWKGRLENAKKVNIYRDAYYRSLLVLLGLIYEPSGGIIAAPTT SLPEIIGGSRNWDYRYVWIRDASYSAEALIKAGLLVKARDIISFLTAMVDPSSKSFDHPLYTIDGTAPPAEEILDWLEGH KKSFPVRVGNAAYMQIQMDVEGAYMNALYEYYNTSKDSKYVNEIWWAIEAIAEWTKKSWKWKSTDLWEQRGVEEHFTHTK VMNWVALDRASKLAKELGYKNEAEEWISIAEEIRKDVLDNGYSEKLGYFTRYYGSDSVDSALLTLPLYDFIDAKDPRFLK THEKIEKDLMISDGFLLRYKDDFMGSAKHPFTLVSTWLTRVYIRLGEIGKAKKVIEKLISCSTSSLLLAEHLDQNTCEPR GNFPQAFPHAGLVMAIVELEERLV
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006465 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF00723 Glyco_hydro_15 [H]
EC number: NA
Molecular weight: Translated: 67102; Mature: 67102
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00239 RECEPTOR_TYR_KIN_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYYEFLSNGITSALIKNGSVEWLPLPKFDSSSIFTRILDEERGGYFSIRPADEKYDII CCCHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCH HEDYVENTLILRTAFKSEKGKAEILDFLPLSLSGIIRIYESEIDLKVDIKPFFEYGLVTP HHHHHCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHCCCCH AIIKARRGLIFRNPKSKEGIEILIGGEYVPLDNTEFTLKKGKGYIYLLYSKDLRYGLFSN HHHHHHCCCEECCCCCCCCEEEEECCEEECCCCCEEEEECCCCEEEEEEECCCCEEEECC KGFVYSEPYEALNKAIKYWKGRLENAKKVNIYRDAYYRSLLVLLGLIYEPSGGIIAAPTT CCCEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCC SLPEIIGGSRNWDYRYVWIRDASYSAEALIKAGLLVKARDIISFLTAMVDPSSKSFDHPL CCHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC YTIDGTAPPAEEILDWLEGHKKSFPVRVGNAAYMQIQMDVEGAYMNALYEYYNTSKDSKY EEECCCCCCHHHHHHHHHCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHCCCCCHHH VNEIWWAIEAIAEWTKKSWKWKSTDLWEQRGVEEHFTHTKVMNWVALDRASKLAKELGYK HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC NEAEEWISIAEEIRKDVLDNGYSEKLGYFTRYYGSDSVDSALLTLPLYDFIDAKDPRFLK CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH THEKIEKDLMISDGFLLRYKDDFMGSAKHPFTLVSTWLTRVYIRLGEIGKAKKVIEKLIS HHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC CSTSSLLLAEHLDQNTCEPRGNFPQAFPHAGLVMAIVELEERLV CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIRYYEFLSNGITSALIKNGSVEWLPLPKFDSSSIFTRILDEERGGYFSIRPADEKYDII CCCHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCH HEDYVENTLILRTAFKSEKGKAEILDFLPLSLSGIIRIYESEIDLKVDIKPFFEYGLVTP HHHHHCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHCCCCH AIIKARRGLIFRNPKSKEGIEILIGGEYVPLDNTEFTLKKGKGYIYLLYSKDLRYGLFSN HHHHHHCCCEECCCCCCCCEEEEECCEEECCCCCEEEEECCCCEEEEEEECCCCEEEECC KGFVYSEPYEALNKAIKYWKGRLENAKKVNIYRDAYYRSLLVLLGLIYEPSGGIIAAPTT CCCEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCC SLPEIIGGSRNWDYRYVWIRDASYSAEALIKAGLLVKARDIISFLTAMVDPSSKSFDHPL CCHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC YTIDGTAPPAEEILDWLEGHKKSFPVRVGNAAYMQIQMDVEGAYMNALYEYYNTSKDSKY EEECCCCCCHHHHHHHHHCCCCCCCEEECCEEEEEEEEECCHHHHHHHHHHHCCCCCHHH VNEIWWAIEAIAEWTKKSWKWKSTDLWEQRGVEEHFTHTKVMNWVALDRASKLAKELGYK HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC NEAEEWISIAEEIRKDVLDNGYSEKLGYFTRYYGSDSVDSALLTLPLYDFIDAKDPRFLK CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH THEKIEKDLMISDGFLLRYKDDFMGSAKHPFTLVSTWLTRVYIRLGEIGKAKKVIEKLIS HHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC CSTSSLLLAEHLDQNTCEPRGNFPQAFPHAGLVMAIVELEERLV CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]