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The map label for this gene is ydiS [H]

Identifier: 227828774

GI number: 227828774

Start: 2365870

End: 2367093

Strand: Direct

Name: ydiS [H]

Synonym: M1425_2548

Alternate gene names: 227828774

Gene position: 2365870-2367093 (Clockwise)

Preceding gene: 227828773

Following gene: 227828775

Centisome position: 90.69

GC content: 36.19

Gene sequence:

>1224_bases
GTGAGCTTCGACGCCGATATTGTAATTGTTGGGGGAGGATTAGCTGGACTTTCTGCTGCAATTACTGCGAACAGAGAAGG
ATTGTCTACAATTGTATTAGAAAGGGGAGAATATTCTGGAAGTAAAAACGTTTCTGGAGGAAGAATGTATGTCCACGCAT
TATCACAACTATTTCCAGATGCATTAGAGAGAGCACCCTTAGAAAGACCAGTAACTAAAGAAACATATGAGATTTATTGT
GAGGAAGGAAAGAAAATCACTTTTTCATTCCAACATAAAACTAAAAATAGTTATACTATATTAAGGGCTAAATTCGATCA
ATGGCTAGCTAAAGAGGCTGAAAATGAGGGAGTATTGATTTCTTATACTACGCTCATAACCAACGCTAGACGGGAAAAAG
ACTACGTGGTAATAGAAACAAACAGAGGTGAACTTAAGGCACCTTTGGTTATAGATGCAGGTGGAATTACTGCTCCATTG
TCTAGATTCTTAGGAGTTAAAAAACTAGAACCTAAAACTTTAATGTTAGGAGTTAAAGAGGTGTTGGATATTAAACCAGA
GATACCAGAAAATGAGGGTGAGGCTAGAACTATAATGGGGTTAATAGGAAATTTGAAAGGAGGAGGTTTCGTCTACACAA
ATAAGGATACATTATCCATAGGTGTTACGATAAAAGTTGAATCATTATATAATTCTAGTATACCATCACATGAAATTGTG
GAAAGATTTCGGGAATCGTTAGGCTTAAGCGGGAATATACTCGAATACTCCGCACACTTAATTCCATATTACGGTTATGA
TAAGATAGGTAAGATTCATGACAAGAATTTAATCTTAGTAGGCGATGCAGCTGGATTTCTAATAAATGACGGATTTAACA
TTAGAGGAATGGATTTGGCAATAGGTTCTGGAATTATTGCTGGAAAGGCTGCCAAGAAGATCAAGGAGCTTAACGATTAT
AGTAGAACTGATATCTATTACGAGATGCTCAAAGAATCGTTTGTGCTAAAGGATATGAAAACAGCTTTAAGGTCTTTTAG
TGTATTACGTGAGGAGGAAGTTTTCACTAAGTACCCTAAGGTTATTTGTAATGTTCTAGGCAAGTTATTTACAGTGACTG
GCGATGGAAAGGAGAGGCCAATAAACGTTTTGCTTCAAGAAAGTAAAAGCGAAAACGTAAATACTACGAAGATGTTATCT
GATCTTATGAGGTTATTTATATGA

Upstream 100 bases:

>100_bases
TACATAATTAGTAATGGAAATGAGATATTATTGAACATGATAAAAAAAGCAAATATAGGAAAGCCAAACACATATATATG
ACCTTTCAAAATATAATAGT

Downstream 100 bases:

>100_bases
TGGATCTCCTAAAAAGATTATCATTAAACAAGTATAATGTAGATAGGACCACTCATATAGAAGTAAATACTGATATCTGT
CTAACTTGTAAAGATAAGCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSFDADIVIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYVHALSQLFPDALERAPLERPVTKETYEIYC
EEGKKITFSFQHKTKNSYTILRAKFDQWLAKEAENEGVLISYTTLITNARREKDYVVIETNRGELKAPLVIDAGGITAPL
SRFLGVKKLEPKTLMLGVKEVLDIKPEIPENEGEARTIMGLIGNLKGGGFVYTNKDTLSIGVTIKVESLYNSSIPSHEIV
ERFRESLGLSGNILEYSAHLIPYYGYDKIGKIHDKNLILVGDAAGFLINDGFNIRGMDLAIGSGIIAGKAAKKIKELNDY
SRTDIYYEMLKESFVLKDMKTALRSFSVLREEEVFTKYPKVICNVLGKLFTVTGDGKERPINVLLQESKSENVNTTKMLS
DLMRLFI

Sequences:

>Translated_407_residues
MSFDADIVIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYVHALSQLFPDALERAPLERPVTKETYEIYC
EEGKKITFSFQHKTKNSYTILRAKFDQWLAKEAENEGVLISYTTLITNARREKDYVVIETNRGELKAPLVIDAGGITAPL
SRFLGVKKLEPKTLMLGVKEVLDIKPEIPENEGEARTIMGLIGNLKGGGFVYTNKDTLSIGVTIKVESLYNSSIPSHEIV
ERFRESLGLSGNILEYSAHLIPYYGYDKIGKIHDKNLILVGDAAGFLINDGFNIRGMDLAIGSGIIAGKAAKKIKELNDY
SRTDIYYEMLKESFVLKDMKTALRSFSVLREEEVFTKYPKVICNVLGKLFTVTGDGKERPINVLLQESKSENVNTTKMLS
DLMRLFI
>Mature_406_residues
SFDADIVIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYVHALSQLFPDALERAPLERPVTKETYEIYCE
EGKKITFSFQHKTKNSYTILRAKFDQWLAKEAENEGVLISYTTLITNARREKDYVVIETNRGELKAPLVIDAGGITAPLS
RFLGVKKLEPKTLMLGVKEVLDIKPEIPENEGEARTIMGLIGNLKGGGFVYTNKDTLSIGVTIKVESLYNSSIPSHEIVE
RFRESLGLSGNILEYSAHLIPYYGYDKIGKIHDKNLILVGDAAGFLINDGFNIRGMDLAIGSGIIAGKAAKKIKELNDYS
RTDIYYEMLKESFVLKDMKTALRSFSVLREEEVFTKYPKVICNVLGKLFTVTGDGKERPINVLLQESKSENVNTTKMLSD
LMRLFI

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=387, Percent_Identity=26.0981912144703, Blast_Score=76, Evalue=5e-14,
Organism=Escherichia coli, GI1787991, Length=391, Percent_Identity=33.7595907928389, Blast_Score=219, Evalue=4e-58,
Organism=Escherichia coli, GI1786227, Length=394, Percent_Identity=33.502538071066, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI87082155, Length=405, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI25144720, Length=383, Percent_Identity=26.3707571801567, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24652256, Length=382, Percent_Identity=28.2722513089005, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45133; Mature: 45002

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDADIVIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYVHALSQLFPD
CCCCCCEEEECCCHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALERAPLERPVTKETYEIYCEEGKKITFSFQHKTKNSYTILRAKFDQWLAKEAENEGVLI
HHHHCCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCEEE
SYTTLITNARREKDYVVIETNRGELKAPLVIDAGGITAPLSRFLGVKKLEPKTLMLGVKE
EEHHHHHCCCCCCCEEEEECCCCCEECCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH
VLDIKPEIPENEGEARTIMGLIGNLKGGGFVYTNKDTLSIGVTIKVESLYNSSIPSHEIV
HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCHHHHH
ERFRESLGLSGNILEYSAHLIPYYGYDKIGKIHDKNLILVGDAAGFLINDGFNIRGMDLA
HHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEE
IGSGIIAGKAAKKIKELNDYSRTDIYYEMLKESFVLKDMKTALRSFSVLREEEVFTKYPK
ECCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VICNVLGKLFTVTGDGKERPINVLLQESKSENVNTTKMLSDLMRLFI
HHHHHHHHHEEEECCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
SFDADIVIVGGGLAGLSAAITANREGLSTIVLERGEYSGSKNVSGGRMYVHALSQLFPD
CCCCCEEEECCCHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALERAPLERPVTKETYEIYCEEGKKITFSFQHKTKNSYTILRAKFDQWLAKEAENEGVLI
HHHHCCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCEEE
SYTTLITNARREKDYVVIETNRGELKAPLVIDAGGITAPLSRFLGVKKLEPKTLMLGVKE
EEHHHHHCCCCCCCEEEEECCCCCEECCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH
VLDIKPEIPENEGEARTIMGLIGNLKGGGFVYTNKDTLSIGVTIKVESLYNSSIPSHEIV
HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCHHHHH
ERFRESLGLSGNILEYSAHLIPYYGYDKIGKIHDKNLILVGDAAGFLINDGFNIRGMDLA
HHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEE
IGSGIIAGKAAKKIKELNDYSRTDIYYEMLKESFVLKDMKTALRSFSVLREEEVFTKYPK
ECCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VICNVLGKLFTVTGDGKERPINVLLQESKSENVNTTKMLSDLMRLFI
HHHHHHHHHEEEECCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]