| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828769
Identifier: 227828769
GI number: 227828769
Start: 2360863
End: 2361906
Strand: Direct
Name: 227828769
Synonym: M1425_2542
Alternate gene names: NA
Gene position: 2360863-2361906 (Clockwise)
Preceding gene: 227828764
Following gene: 227828771
Centisome position: 90.5
GC content: 39.18
Gene sequence:
>1044_bases ATGCCAATTCCCTCATTAAACACTCAACAAATAGGGTATAAATTACTTTCCATGAGTAACTTCCAAGGGAGAAAGGGAGA GGAAGTTACAAAAACCTTGATCTCAGTATCATTACACAAAGATTCAGTGGAAAACGTTTCCGGAGCTTACAACGTATCAC CACAAACGGTGAGGAATTACGTTGAAGAACAAGGGTTACAAGTAGCGGAAAAAACACTGGAACAGGTGAAACAAATCTCA CTCGAAACGCTTAAGGGCGTGAAGGAGATAGAACTATCAATAGATTGGACAACAATAACTTGGTACGGAAAACCTGTAGA AGGTTTGGGAAGCTCAGAAAAGGGATACTCGTGGAACTACGCAACAGCTACAACGAAATACGAAGGAAAAATCCTCATAC TTGCTTTCATACCGCAAGTTAATGGGATGACAAAGGATGAGATTGTCAAGGTCTTGATTGAACAAGTGGTTGCAATGGGA TTTAGGATTAAACTGATAGCACTTGATGCAGGATTTTACACGGTTGAGGTGATAAAATTCGTATCGCAGTTCAACTACAT TATTGGAGTTCCCGTTGGTGATGTCAAGATCTACGAGGAGTTTGATGGTGAACATGTTACGAATAGTAAGAGGCGTAGTA AGGATGAGCAGGTTAAGTTTAGGCTGATCGTGTATCGCAGGGAGAAGATCAAGAGGAAAAAGATGAAGGTTGTTTACTTC GCTAGGGCTACAAATCTCGATTTACCCAAGAATAAGGTCTTGGAGTTATATAACAAGGTGAGGAATCCGATAGAAACGTC TTATAGGAGTGTTAAATCGTTCCTCCCCTTTACGTGTTCAACAAAGTTCATTTTCCGCATGTTAATCTTCTTACTTGCCG TGCTCGTTTACTCCTTGTACACGATCCTCAAGGATAACGTGAAAATGAGGACTTTCAAATCACTAATTTCAAAAATTATT GAAAATATATCTGAGGCAGAGATTTATTTAAATAAATCGGAGGAAACGCTTACTAATACTACAGGTTTATTTTTAAGGAG GTGA
Upstream 100 bases:
>100_bases TTGTTGAACATAACCAAGTTTATAACAACATCAAGAATTCAACAAATTGGAAAAAAAGTTTAAAGCGAGGGAATCGGTAT TACCATAAGGGCTCATGGTA
Downstream 100 bases:
>100_bases TTTTGGGAGTACCGCTTTGAGATAAATCCTCCAACTCCTTAAGCAATGGTAAGTACTCCTTGCCGAAATAAGCTTTCCCA TAAATCCACTCCTTATTCCA
Product: transposase IS4 family protein
Products: NA
Alternate protein names: Transposase ISC; Partial Transposase In ISC; Transposon; Second ORF In Transposon ISC; ORF1 In Transposon ISC; Transposase In ISC; Partial Transposase ISC; Third ORF In Transposon ISC; Second ORF In Partial Transposon ISC
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPIPSLNTQQIGYKLLSMSNFQGRKGEEVTKTLISVSLHKDSVENVSGAYNVSPQTVRNYVEEQGLQVAEKTLEQVKQIS LETLKGVKEIELSIDWTTITWYGKPVEGLGSSEKGYSWNYATATTKYEGKILILAFIPQVNGMTKDEIVKVLIEQVVAMG FRIKLIALDAGFYTVEVIKFVSQFNYIIGVPVGDVKIYEEFDGEHVTNSKRRSKDEQVKFRLIVYRREKIKRKKMKVVYF ARATNLDLPKNKVLELYNKVRNPIETSYRSVKSFLPFTCSTKFIFRMLIFLLAVLVYSLYTILKDNVKMRTFKSLISKII ENISEAEIYLNKSEETLTNTTGLFLRR
Sequences:
>Translated_347_residues MPIPSLNTQQIGYKLLSMSNFQGRKGEEVTKTLISVSLHKDSVENVSGAYNVSPQTVRNYVEEQGLQVAEKTLEQVKQIS LETLKGVKEIELSIDWTTITWYGKPVEGLGSSEKGYSWNYATATTKYEGKILILAFIPQVNGMTKDEIVKVLIEQVVAMG FRIKLIALDAGFYTVEVIKFVSQFNYIIGVPVGDVKIYEEFDGEHVTNSKRRSKDEQVKFRLIVYRREKIKRKKMKVVYF ARATNLDLPKNKVLELYNKVRNPIETSYRSVKSFLPFTCSTKFIFRMLIFLLAVLVYSLYTILKDNVKMRTFKSLISKII ENISEAEIYLNKSEETLTNTTGLFLRR >Mature_346_residues PIPSLNTQQIGYKLLSMSNFQGRKGEEVTKTLISVSLHKDSVENVSGAYNVSPQTVRNYVEEQGLQVAEKTLEQVKQISL ETLKGVKEIELSIDWTTITWYGKPVEGLGSSEKGYSWNYATATTKYEGKILILAFIPQVNGMTKDEIVKVLIEQVVAMGF RIKLIALDAGFYTVEVIKFVSQFNYIIGVPVGDVKIYEEFDGEHVTNSKRRSKDEQVKFRLIVYRREKIKRKKMKVVYFA RATNLDLPKNKVLELYNKVRNPIETSYRSVKSFLPFTCSTKFIFRMLIFLLAVLVYSLYTILKDNVKMRTFKSLISKIIE NISEAEIYLNKSEETLTNTTGLFLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39861; Mature: 39730
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPSLNTQQIGYKLLSMSNFQGRKGEEVTKTLISVSLHKDSVENVSGAYNVSPQTVRNY CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHH VEEQGLQVAEKTLEQVKQISLETLKGVKEIELSIDWTTITWYGKPVEGLGSSEKGYSWNY HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCHHCCCCCCCCCCEEE ATATTKYEGKILILAFIPQVNGMTKDEIVKVLIEQVVAMGFRIKLIALDAGFYTVEVIKF EEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHH VSQFNYIIGVPVGDVKIYEEFDGEHVTNSKRRSKDEQVKFRLIVYRREKIKRKKMKVVYF HHHCCCEEECCCCCEEEEECCCCCCCCCCHHCCCCHHEEEEHEEHHHHHHHHHHEEEEEE ARATNLDLPKNKVLELYNKVRNPIETSYRSVKSFLPFTCSTKFIFRMLIFLLAVLVYSLY EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TILKDNVKMRTFKSLISKIIENISEAEIYLNKSEETLTNTTGLFLRR HHHHCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHCCCCCEEEC >Mature Secondary Structure PIPSLNTQQIGYKLLSMSNFQGRKGEEVTKTLISVSLHKDSVENVSGAYNVSPQTVRNY CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHH VEEQGLQVAEKTLEQVKQISLETLKGVKEIELSIDWTTITWYGKPVEGLGSSEKGYSWNY HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCHHCCCCCCCCCCEEE ATATTKYEGKILILAFIPQVNGMTKDEIVKVLIEQVVAMGFRIKLIALDAGFYTVEVIKF EEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHH VSQFNYIIGVPVGDVKIYEEFDGEHVTNSKRRSKDEQVKFRLIVYRREKIKRKKMKVVYF HHHCCCEEECCCCCEEEEECCCCCCCCCCHHCCCCHHEEEEHEEHHHHHHHHHHEEEEEE ARATNLDLPKNKVLELYNKVRNPIETSYRSVKSFLPFTCSTKFIFRMLIFLLAVLVYSLY EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TILKDNVKMRTFKSLISKIIENISEAEIYLNKSEETLTNTTGLFLRR HHHHCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA