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The map label for this gene is dcd [H]

Identifier: 227828644

GI number: 227828644

Start: 2227253

End: 2227732

Strand: Direct

Name: dcd [H]

Synonym: M1425_2398

Alternate gene names: 227828644

Gene position: 2227253-2227732 (Clockwise)

Preceding gene: 227828643

Following gene: 227828646

Centisome position: 85.37

GC content: 35.0

Gene sequence:

>480_bases
ATGATACTTTCTCACCAGTCAATTAAAAAGCTGTTAGGCAAAGTGATAATGAATTACGTTGAGGATAACGTAAGGGAGAA
CGGCTACGATTTAAGAATATGTGGTGAAAAATACTACGAAGTTGAAGAGGGTGCTAAATTACCAAGTATAAAGGCTAAAA
TTAGGGAAATACCTTTTAAAGAGGTTGCTAATCTATCACCCCTTAATACTTACTTATTCGAGTCATGTGAGGAGTTTAAC
ATGCCAGATAACTTAGCGGTGTTGATAACCTTAAAAAGTACTATGGCTAGGAACGGTTTTCTAGCTCCTCCTACTGTTAT
TGATGCTGGGTACAAGGGAAAGATTTACTTAGCTATAACTTCCGTCTATGGTTCTTCATTAGTTAAGGAAATCAGTACTC
ATCATTTAATATTTTTAGAATTAGATCAGAAAACTGAAAAAGTTTACAGTGGCAAATATCAAGGAGGTATACCAATCTAG

Upstream 100 bases:

>100_bases
CATTTGTCTTAGTTTCATGGTTATTACATCCTAAGCTGAGGGAGGTAAAGTTATAATAAGCAGAATCCCTTTTTAGCTTT
TCACGCGAATTAATTCATTG

Downstream 100 bases:

>100_bases
CTGAGAACGGAAGAGTACAATAAAATTCTTTGCTGATAAACCGGAAAATATTTTTCTGGAACTTTAAAATATTCATTTGA
AAATATACAGAACTCGCTAA

Product: deoxycytidine triphosphate deaminase (dcD-2)

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MILSHQSIKKLLGKVIMNYVEDNVRENGYDLRICGEKYYEVEEGAKLPSIKAKIREIPFKEVANLSPLNTYLFESCEEFN
MPDNLAVLITLKSTMARNGFLAPPTVIDAGYKGKIYLAITSVYGSSLVKEISTHHLIFLELDQKTEKVYSGKYQGGIPI

Sequences:

>Translated_159_residues
MILSHQSIKKLLGKVIMNYVEDNVRENGYDLRICGEKYYEVEEGAKLPSIKAKIREIPFKEVANLSPLNTYLFESCEEFN
MPDNLAVLITLKSTMARNGFLAPPTVIDAGYKGKIYLAITSVYGSSLVKEISTHHLIFLELDQKTEKVYSGKYQGGIPI
>Mature_159_residues
MILSHQSIKKLLGKVIMNYVEDNVRENGYDLRICGEKYYEVEEGAKLPSIKAKIREIPFKEVANLSPLNTYLFESCEEFN
MPDNLAVLITLKSTMARNGFLAPPTVIDAGYKGKIYLAITSVYGSSLVKEISTHHLIFLELDQKTEKVYSGKYQGGIPI

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 17910; Mature: 17910

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSHQSIKKLLGKVIMNYVEDNVRENGYDLRICGEKYYEVEEGAKLPSIKAKIREIPFK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHEEHHCCCCCCHHHHHHHHCCHH
EVANLSPLNTYLFESCEEFNMPDNLAVLITLKSTMARNGFLAPPTVIDAGYKGKIYLAIT
HHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCCCCCEEECCCCCEEEEEEE
SVYGSSLVKEISTHHLIFLELDQKTEKVYSGKYQGGIPI
CHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MILSHQSIKKLLGKVIMNYVEDNVRENGYDLRICGEKYYEVEEGAKLPSIKAKIREIPFK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHEEHHCCCCCCHHHHHHHHCCHH
EVANLSPLNTYLFESCEEFNMPDNLAVLITLKSTMARNGFLAPPTVIDAGYKGKIYLAIT
HHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCCCCCEEECCCCCEEEEEEE
SVYGSSLVKEISTHHLIFLELDQKTEKVYSGKYQGGIPI
CHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA