| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is dppD [H]
Identifier: 227828640
GI number: 227828640
Start: 2222234
End: 2223265
Strand: Direct
Name: dppD [H]
Synonym: M1425_2393
Alternate gene names: 227828640
Gene position: 2222234-2223265 (Clockwise)
Preceding gene: 227828639
Following gene: 227828641
Centisome position: 85.18
GC content: 36.34
Gene sequence:
>1032_bases GTGAAAGGACAAATGTCTAATAAATTACTATCATTGGAGAATTTGTGGATAACTTACTACAAGGGGAATAAATCTGCGTA TGCAGTGAGAGGAGTGAGTTTAGAGGTCAATTACAATCAAGTCGTAGGTATCGTTGGTGAAAGCGGTTCTGGAAAATCAA CCTTAGGTCACTCCATAATAGGTTTATTGCCTAATAATGCAAGGGTTGAAAAGGGTAAAATCATTTTCGAAGAGACGGAT CTAGCTAAGATAAACAAAAGTGATTTCTATAGGTTCAGAGGCAAAAGGGGGATCTTTATGATATTTCAAGACCCCATGAC AAGCTTAAATCCTACAATAAAAGTTAAGGAGCAATTGGTAGAAATAATAAAGAACAGACCCAATGAAAATAGTGTTAATA CCTTAAGCCACTGGTTTATCGGTAAAGTAAATAAAAGTGAGATAGTTAGAGATGAGAAGCAACTAATAGAATCCCTAAAG AAAGTTGGTTTCAGAAACCCTGATGAGATTCTAGATAAATATCCGCATCAGCTTTCTGGAGGGGAAAGACAGAGAATAAT GATAGCGATGGCTTATCTATTAAAACCTAAACTACTCATAGCTGATGAACCTACAACAGCCTTAGATGTAATAACTCAGG CACAAGTATTGAAAATGTTATTAGAACTAAAGGAAGAATATAAATCGTCGATTATCTTCATAAGCCATGACATTACATTA GTGAGCCAAATCAGTGATAAGGTAATTGTTATGTATGGAGGAATTGTCATGGAGGAAGCTAGTTCCGAGGAAATGCTTAA GAACCCCCTTAATCCATATACTAAGGGACTAGTCGCATCAATACCCAATTATTTCAAAGGGGAGGGTAAAATATCTTCAA TACCAGGATTTCCTCCAAATATATTTGAACTACCTCAAGGTTGTCCATTTAACCCGAGGTGTAATTTGGCAATGTCAGTT TGTAAATCTCAATTACCTAAATTGAAAAGCATAGGTGAGTCTCACAGTGTCGCATGCCACCTCTATAGTTGA
Upstream 100 bases:
>100_bases TGGTGGTCATCAATATTTCCCGCAATAATCATAACGCTAATGGCCTTAGGCTACTCATTAGCAGGAGATGGGTTAAGAGA TATATTAGATCCAAGATTAG
Downstream 100 bases:
>100_bases AATAGAAAACCTAAGAGTCAGTTACAAGGTAAGAGAAGGGAAGAAGATTGCCATAGATAACGTAACATTGAGTATTACTA AAGGAGAGACTCTAGCAGTG
Product: oligopeptide/dipeptide ABC transporter ATPase
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKGQMSNKLLSLENLWITYYKGNKSAYAVRGVSLEVNYNQVVGIVGESGSGKSTLGHSIIGLLPNNARVEKGKIIFEETD LAKINKSDFYRFRGKRGIFMIFQDPMTSLNPTIKVKEQLVEIIKNRPNENSVNTLSHWFIGKVNKSEIVRDEKQLIESLK KVGFRNPDEILDKYPHQLSGGERQRIMIAMAYLLKPKLLIADEPTTALDVITQAQVLKMLLELKEEYKSSIIFISHDITL VSQISDKVIVMYGGIVMEEASSEEMLKNPLNPYTKGLVASIPNYFKGEGKISSIPGFPPNIFELPQGCPFNPRCNLAMSV CKSQLPKLKSIGESHSVACHLYS
Sequences:
>Translated_343_residues MKGQMSNKLLSLENLWITYYKGNKSAYAVRGVSLEVNYNQVVGIVGESGSGKSTLGHSIIGLLPNNARVEKGKIIFEETD LAKINKSDFYRFRGKRGIFMIFQDPMTSLNPTIKVKEQLVEIIKNRPNENSVNTLSHWFIGKVNKSEIVRDEKQLIESLK KVGFRNPDEILDKYPHQLSGGERQRIMIAMAYLLKPKLLIADEPTTALDVITQAQVLKMLLELKEEYKSSIIFISHDITL VSQISDKVIVMYGGIVMEEASSEEMLKNPLNPYTKGLVASIPNYFKGEGKISSIPGFPPNIFELPQGCPFNPRCNLAMSV CKSQLPKLKSIGESHSVACHLYS >Mature_343_residues MKGQMSNKLLSLENLWITYYKGNKSAYAVRGVSLEVNYNQVVGIVGESGSGKSTLGHSIIGLLPNNARVEKGKIIFEETD LAKINKSDFYRFRGKRGIFMIFQDPMTSLNPTIKVKEQLVEIIKNRPNENSVNTLSHWFIGKVNKSEIVRDEKQLIESLK KVGFRNPDEILDKYPHQLSGGERQRIMIAMAYLLKPKLLIADEPTTALDVITQAQVLKMLLELKEEYKSSIIFISHDITL VSQISDKVIVMYGGIVMEEASSEEMLKNPLNPYTKGLVASIPNYFKGEGKISSIPGFPPNIFELPQGCPFNPRCNLAMSV CKSQLPKLKSIGESHSVACHLYS
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9665248, Length=248, Percent_Identity=24.1935483870968, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI42741659, Length=243, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI48994883, Length=337, Percent_Identity=39.7626112759644, Blast_Score=255, Evalue=4e-69, Organism=Escherichia coli, GI1789963, Length=334, Percent_Identity=39.5209580838323, Blast_Score=246, Evalue=1e-66, Organism=Escherichia coli, GI1787759, Length=337, Percent_Identity=36.2017804154303, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1787548, Length=336, Percent_Identity=33.0357142857143, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI145693107, Length=284, Percent_Identity=38.0281690140845, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1787500, Length=324, Percent_Identity=35.4938271604938, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1788506, Length=283, Percent_Identity=40.2826855123675, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1789962, Length=314, Percent_Identity=35.9872611464968, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1787758, Length=327, Percent_Identity=32.7217125382263, Blast_Score=174, Evalue=6e-45, Organism=Escherichia coli, GI1787547, Length=281, Percent_Identity=33.8078291814947, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1789890, Length=252, Percent_Identity=30.952380952381, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1789891, Length=240, Percent_Identity=34.5833333333333, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1789032, Length=284, Percent_Identity=29.9295774647887, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI48994997, Length=280, Percent_Identity=30, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786398, Length=272, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1788225, Length=250, Percent_Identity=30, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788761, Length=247, Percent_Identity=27.9352226720648, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI87081834, Length=255, Percent_Identity=30.5882352941176, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI87082267, Length=252, Percent_Identity=26.1904761904762, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786703, Length=257, Percent_Identity=28.7937743190661, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790162, Length=269, Percent_Identity=25.6505576208178, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081791, Length=279, Percent_Identity=26.1648745519713, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1789672, Length=280, Percent_Identity=26.0714285714286, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787370, Length=256, Percent_Identity=25.78125, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=32.0833333333333, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786872, Length=236, Percent_Identity=28.8135593220339, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1787105, Length=261, Percent_Identity=29.1187739463602, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789873, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787112, Length=265, Percent_Identity=27.1698113207547, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787712, Length=263, Percent_Identity=27.7566539923954, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI87081709, Length=256, Percent_Identity=24.609375, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=26.1603375527426, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787089, Length=244, Percent_Identity=26.6393442622951, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790467, Length=251, Percent_Identity=24.7011952191235, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788644, Length=274, Percent_Identity=28.4671532846715, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788450, Length=255, Percent_Identity=23.921568627451, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786563, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790544, Length=247, Percent_Identity=24.6963562753036, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1789864, Length=269, Percent_Identity=22.3048327137546, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787164, Length=223, Percent_Identity=26.0089686098655, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789991, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790739, Length=287, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788165, Length=244, Percent_Identity=24.5901639344262, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787792, Length=256, Percent_Identity=23.828125, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787143, Length=254, Percent_Identity=23.6220472440945, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787182, Length=248, Percent_Identity=23.7903225806452, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789593, Length=255, Percent_Identity=24.3137254901961, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1786319, Length=259, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786981, Length=236, Percent_Identity=28.3898305084746, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI48995001, Length=240, Percent_Identity=25.8333333333333, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=221, Percent_Identity=27.6018099547511, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786803, Length=127, Percent_Identity=27.5590551181102, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788897, Length=231, Percent_Identity=25.1082251082251, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193208177, Length=255, Percent_Identity=28.6274509803922, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI25146777, Length=279, Percent_Identity=27.9569892473118, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17558664, Length=251, Percent_Identity=27.4900398406374, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI212646699, Length=240, Percent_Identity=28.75, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71996809, Length=247, Percent_Identity=28.7449392712551, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193211015, Length=247, Percent_Identity=28.7449392712551, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193211017, Length=247, Percent_Identity=28.7449392712551, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17565938, Length=260, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534520, Length=261, Percent_Identity=24.904214559387, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17543740, Length=260, Percent_Identity=26.5384615384615, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567269, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17569145, Length=262, Percent_Identity=26.7175572519084, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17569143, Length=247, Percent_Identity=25.9109311740891, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115535101, Length=231, Percent_Identity=28.1385281385281, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=229, Percent_Identity=30.5676855895196, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321752, Length=249, Percent_Identity=29.3172690763052, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=270, Percent_Identity=25.1851851851852, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=220, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322980, Length=253, Percent_Identity=27.6679841897233, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007184, Length=277, Percent_Identity=25.2707581227437, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI221500365, Length=277, Percent_Identity=25.2707581227437, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI85726357, Length=246, Percent_Identity=29.2682926829268, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI17136662, Length=272, Percent_Identity=29.7794117647059, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574533, Length=246, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 38428; Mature: 38428
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGQMSNKLLSLENLWITYYKGNKSAYAVRGVSLEVNYNQVVGIVGESGSGKSTLGHSII CCCCHHHHHEEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEECCCCCCHHHCCHHE GLLPNNARVEKGKIIFEETDLAKINKSDFYRFRGKRGIFMIFQDPMTSLNPTIKVKEQLV EECCCCCEEECCEEEEEECCCHHCCHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHH EIIKNRPNENSVNTLSHWFIGKVNKSEIVRDEKQLIESLKKVGFRNPDEILDKYPHQLSG HHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCC GERQRIMIAMAYLLKPKLLIADEPTTALDVITQAQVLKMLLELKEEYKSSIIFISHDITL CCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHE VSQISDKVIVMYGGIVMEEASSEEMLKNPLNPYTKGLVASIPNYFKGEGKISSIPGFPPN EHHCCCCEEEEECCEEEECCCCHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCC IFELPQGCPFNPRCNLAMSVCKSQLPKLKSIGESHSVACHLYS HHHCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEECC >Mature Secondary Structure MKGQMSNKLLSLENLWITYYKGNKSAYAVRGVSLEVNYNQVVGIVGESGSGKSTLGHSII CCCCHHHHHEEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEECCCCCCHHHCCHHE GLLPNNARVEKGKIIFEETDLAKINKSDFYRFRGKRGIFMIFQDPMTSLNPTIKVKEQLV EECCCCCEEECCEEEEEECCCHHCCHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHH EIIKNRPNENSVNTLSHWFIGKVNKSEIVRDEKQLIESLKKVGFRNPDEILDKYPHQLSG HHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCC GERQRIMIAMAYLLKPKLLIADEPTTALDVITQAQVLKMLLELKEEYKSSIIFISHDITL CCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHE VSQISDKVIVMYGGIVMEEASSEEMLKNPLNPYTKGLVASIPNYFKGEGKISSIPGFPPN EHHCCCCEEEEECCEEEECCCCHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCC IFELPQGCPFNPRCNLAMSVCKSQLPKLKSIGESHSVACHLYS HHHCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1766370; 9384377 [H]