| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is ctaC [H]
Identifier: 227828629
GI number: 227828629
Start: 2211810
End: 2212250
Strand: Direct
Name: ctaC [H]
Synonym: M1425_2382
Alternate gene names: 227828629
Gene position: 2211810-2212250 (Clockwise)
Preceding gene: 227828628
Following gene: 227828630
Centisome position: 84.78
GC content: 36.73
Gene sequence:
>441_bases TTGGAAAAAGCCAGGATATTTGAACTGTCAACTATAGTATTTGCAATTGTAATCTTAACAGTTCTGGGCATTTTTTCAGA TATCTATCTGAATTCAATAAACACTGGAGCCTATCTATCAACTACTCAAAGGCAAGACGCTATTCCTATTAAGGTAATAG CTATGCAATACGCTTGGGAATTCGTATATCCTAATGGGACTACCACAACCAATGAATTGGTATTGAAGGCCAATCAGACC TATTTACTTGAAATCCAATCAAAAGACGTTATTCACGCCTTTTATATACCGCAGTTAGGGTTCAAGTTTGAAGCGATACC GGGATATGTGTACGATTTCTATATAATCGTTAATAAACCTGGAGTATATGATATATGGTGTGCTGAATTCTGTGGTCCTG GCCATTACTTAATGAAAGGAACCTTGATAGTGGTGAGTTAG
Upstream 100 bases:
>100_bases TCAAGCAATCCCATGATTAACCAATTTTTAATAGGTCAATTTTTAGGTACTTCCCTAATTTTGTTTTCGATCTCAATTTT CATAAACGTGGTGATGGGGA
Downstream 100 bases:
>100_bases CATGAGTACCAATAAGAGAATGACTCCAAAAGATTATGTGTTGTGGATAGTCACGATATTGGCATTTTTCTTCTTCTTTT TATGGATAGGGGATTTCGGA
Product: cytochrome C oxidase subunit II
Products: NA
Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MEKARIFELSTIVFAIVILTVLGIFSDIYLNSINTGAYLSTTQRQDAIPIKVIAMQYAWEFVYPNGTTTTNELVLKANQT YLLEIQSKDVIHAFYIPQLGFKFEAIPGYVYDFYIIVNKPGVYDIWCAEFCGPGHYLMKGTLIVVS
Sequences:
>Translated_146_residues MEKARIFELSTIVFAIVILTVLGIFSDIYLNSINTGAYLSTTQRQDAIPIKVIAMQYAWEFVYPNGTTTTNELVLKANQT YLLEIQSKDVIHAFYIPQLGFKFEAIPGYVYDFYIIVNKPGVYDIWCAEFCGPGHYLMKGTLIVVS >Mature_146_residues MEKARIFELSTIVFAIVILTVLGIFSDIYLNSINTGAYLSTTQRQDAIPIKVIAMQYAWEFVYPNGTTTTNELVLKANQT YLLEIQSKDVIHAFYIPQLGFKFEAIPGYVYDFYIIVNKPGVYDIWCAEFCGPGHYLMKGTLIVVS
Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]
COG id: COG1622
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786635, Length=96, Percent_Identity=36.4583333333333, Blast_Score=73, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001505 - InterPro: IPR008972 - InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR014222 - InterPro: IPR015964 - InterPro: IPR002429 - InterPro: IPR011759 [H]
Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 16552; Mature: 16552
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKARIFELSTIVFAIVILTVLGIFSDIYLNSINTGAYLSTTQRQDAIPIKVIAMQYAWE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEE FVYPNGTTTTNELVLKANQTYLLEIQSKDVIHAFYIPQLGFKFEAIPGYVYDFYIIVNKP EEECCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCEEECCCCEEEEEEEEEECC GVYDIWCAEFCGPGHYLMKGTLIVVS CCEEEEHHHHCCCCCEEEEEEEEEEC >Mature Secondary Structure MEKARIFELSTIVFAIVILTVLGIFSDIYLNSINTGAYLSTTQRQDAIPIKVIAMQYAWE CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEE FVYPNGTTTTNELVLKANQTYLLEIQSKDVIHAFYIPQLGFKFEAIPGYVYDFYIIVNKP EEECCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCCEEECCCCEEEEEEEEEECC GVYDIWCAEFCGPGHYLMKGTLIVVS CCEEEEHHHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7678007 [H]