| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828586
Identifier: 227828586
GI number: 227828586
Start: 2163441
End: 2164283
Strand: Direct
Name: 227828586
Synonym: M1425_2340
Alternate gene names: NA
Gene position: 2163441-2164283 (Clockwise)
Preceding gene: 227828583
Following gene: 227828588
Centisome position: 82.93
GC content: 41.16
Gene sequence:
>843_bases ATGGGTTATGTAGACGCTCATACACACGTTTGGTTTAAGGAAGCTCTACCCAAGGATTTCTTCTTTAACGATTCGGGCTA TGAGTATACACCACCTAGCGTTCAAGATATTACAAATGAAATGGACAGTGCTAATATCGACTATATAGTGATAATAGCAT ATCCCAGCAGAGAGATATGGCGTACTAAGGAGGACTTTCCAATCAACATGATAAGAGTTGTGAAGGAGTACGCAAATAGG TTTTCCATTGTTGGTGGGATCGAGCCAAACAAGTTGAACCTCAATGAGGCTAAGGAGTGGTTAGAAAAGCAATATGAGGC CGGGGTTTCCGGCTTTAAGTTGCATCCAGTCCACTCTCATGTAAAGCCAAATGCTTATAGAGAGGAGGAAGGTGGGCTGA AACAACTTGAGTTACTTTACGAGTTCGCGCAAGATCACAACTTACCAGTTATTATTCACACTGGTACTAGTGTGTTCTTA AAGGCTAGGAATAAGTACGCTGATCCAATATTCGTTGATGACATAGCTGTGGATTTTCCAAGGCTAAAGATCGTATTAGC CCATATGGGGAGGCCCAATTACGTCCCAACAGCTTTCCAACTGGTTAGGATAAGGAAGAACATCTACGGTGAAATCTCTT CCATTCCTCCCAAGAAACTATTGGAATATTTGCCTAGACTTGAGGAAATAAGCTATAAGACGATTTACGGCAGTGATTAC GGTGGGCCGGGTATAAAAAGTATCTCATATAACCTAAAGGAGTTTCTGTCCATAAACATTAGCGAAAAAGCAAAGTTCGA TATGGCTAGCAATAATCCAAAAGCCTTATATAAGCCCTTATAG
Upstream 100 bases:
>100_bases AAAATGTATAGTATAATTCCTACATTTTATTAATGTGTCAGGATTAATTTTTGTATTTAGAAACGGATTAATTTAAAAGG TACCAAATTGAAATGTATTT
Downstream 100 bases:
>100_bases TGATATTTTTACTTCCTTATCTTCAATTGATGACCTATATATTCCATCAATAATAGAATGAAGGATTACACTCTCCTCAC CAGTTACTGGAGGTTCCTTA
Product: amidohydrolase 2
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MGYVDAHTHVWFKEALPKDFFFNDSGYEYTPPSVQDITNEMDSANIDYIVIIAYPSREIWRTKEDFPINMIRVVKEYANR FSIVGGIEPNKLNLNEAKEWLEKQYEAGVSGFKLHPVHSHVKPNAYREEEGGLKQLELLYEFAQDHNLPVIIHTGTSVFL KARNKYADPIFVDDIAVDFPRLKIVLAHMGRPNYVPTAFQLVRIRKNIYGEISSIPPKKLLEYLPRLEEISYKTIYGSDY GGPGIKSISYNLKEFLSINISEKAKFDMASNNPKALYKPL
Sequences:
>Translated_280_residues MGYVDAHTHVWFKEALPKDFFFNDSGYEYTPPSVQDITNEMDSANIDYIVIIAYPSREIWRTKEDFPINMIRVVKEYANR FSIVGGIEPNKLNLNEAKEWLEKQYEAGVSGFKLHPVHSHVKPNAYREEEGGLKQLELLYEFAQDHNLPVIIHTGTSVFL KARNKYADPIFVDDIAVDFPRLKIVLAHMGRPNYVPTAFQLVRIRKNIYGEISSIPPKKLLEYLPRLEEISYKTIYGSDY GGPGIKSISYNLKEFLSINISEKAKFDMASNNPKALYKPL >Mature_279_residues GYVDAHTHVWFKEALPKDFFFNDSGYEYTPPSVQDITNEMDSANIDYIVIIAYPSREIWRTKEDFPINMIRVVKEYANRF SIVGGIEPNKLNLNEAKEWLEKQYEAGVSGFKLHPVHSHVKPNAYREEEGGLKQLELLYEFAQDHNLPVIIHTGTSVFLK ARNKYADPIFVDDIAVDFPRLKIVLAHMGRPNYVPTAFQLVRIRKNIYGEISSIPPKKLLEYLPRLEEISYKTIYGSDYG GPGIKSISYNLKEFLSINISEKAKFDMASNNPKALYKPL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32228; Mature: 32097
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYVDAHTHVWFKEALPKDFFFNDSGYEYTPPSVQDITNEMDSANIDYIVIIAYPSREIW CCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHH RTKEDFPINMIRVVKEYANRFSIVGGIEPNKLNLNEAKEWLEKQYEAGVSGFKLHPVHSH CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCC VKPNAYREEEGGLKQLELLYEFAQDHNLPVIIHTGTSVFLKARNKYADPIFVDDIAVDFP CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECHHHCCCH RLKIVLAHMGRPNYVPTAFQLVRIRKNIYGEISSIPPKKLLEYLPRLEEISYKTIYGSDY HHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCEEEEECCCC GGPGIKSISYNLKEFLSINISEKAKFDMASNNPKALYKPL CCCCCHHHHHCHHHHHEECCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure GYVDAHTHVWFKEALPKDFFFNDSGYEYTPPSVQDITNEMDSANIDYIVIIAYPSREIW CCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHH RTKEDFPINMIRVVKEYANRFSIVGGIEPNKLNLNEAKEWLEKQYEAGVSGFKLHPVHSH CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCC VKPNAYREEEGGLKQLELLYEFAQDHNLPVIIHTGTSVFLKARNKYADPIFVDDIAVDFP CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECHHHCCCH RLKIVLAHMGRPNYVPTAFQLVRIRKNIYGEISSIPPKKLLEYLPRLEEISYKTIYGSDY HHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCEEEEECCCC GGPGIKSISYNLKEFLSINISEKAKFDMASNNPKALYKPL CCCCCHHHHHCHHHHHEECCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA