| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is yyaJ [H]
Identifier: 227828476
GI number: 227828476
Start: 2033694
End: 2035040
Strand: Direct
Name: yyaJ [H]
Synonym: M1425_2224
Alternate gene names: 227828476
Gene position: 2033694-2035040 (Clockwise)
Preceding gene: 227828474
Following gene: 227828478
Centisome position: 77.95
GC content: 37.79
Gene sequence:
>1347_bases ATGAGTATCGCTGGGAGAATAGAAAGACTACCTTGGACTTCTTTTCATACGAGACTCTTAGCCCTCTTAACTCTGGGAGA GTTCTTCGAGCTCTACGATCTATTTACTGGAGGCTTCGTAGCATCACAAGTGGCATCGTTTTTTAAAGTATCATCAGCAA CTGGAATCTACTATACTGTTGCAATCTTCTTTCTAGGAGCATTCGTAGGTGCGATAATTTTCAACTATATAGGAGATTCA GTAGGTAGGAGGACTGCACTGATAATCAACATGGCAATAACCTCTATCGCCTTACTGTTGATACCATTTTCTCCAAATAT TCTAACTTTTGGAATATTAAGATTTATAGCTGGTGTAGGAGTTGGACCAGAGGCAATATTAGTTTTAGACGTTTTAATAA CGGAGTTCTTTCCGTCGACTGTCAGAGGTAGGGCGTTAGCAATAGGTTATACTGCAGCTTGGACTGCACCTATAGTCGTC GCAATTCTAGCTTATCTTCTTCTGCCTCATAAATACATTCTATACGGTTGGCAATGGTTATTCATAATAGGAGGCTTAGG TATACTTACAATAATACCATTTAGATTCCTAATTCCAGAATCTCCTAGATGGTTAGAAAGTAAGGGAAGATTGGATGAGG CTGAAAAAATAGTTAGAAGGATGGAGGAAATAGCTATTAAGGAAAAGGGGCAATTGGGAGAACCATTACAGGTCCAAGTT ATAACTTCACAAAGGGTTACAATATCTGAATTATTCTCACCACTGTATAGAAAGAGGACAATAATGCTATGGGTTTTTGA ATTCTTACAAGCTGGCGTATATTACGGTTTTGCCTCACTGGCCCCATCAGTGCTATTTGCGAAAGGTTTCACATTAGTAC ATACTCTACAGTACACGATGATAATCTATACCTCATACTTTATTAGTTCTCTAGCATCAATATTTATCATAGATAGTCAA AAGTTTGACAGAAAATGGCAGGTAAGTATTGTAATGTTATTAATGGGGTTAGTAGGACTAGCTTTTGGATTCTCCTCCTC TCCTCTGGAGGCAGTAGCAACTGGCTTCACATTTGGTTTCTTGTCAAATATATTTTCCAATGCTTTCCATCAATACGGCG CTGAGCTATATCCAACTAGAGTAAGGGCTTTTGCAGATGGTGTACAGTACTCATTAAGTAGATTAGGAAACTACATTTGG TTAACTCTCTTACCAATAGTGTTATATAGTAACGGACCAATTGCAATGTACACAGTGGTATTCATAATGGCTCTTATAGT AACTCTAGATGTGGCAATTTTAGGACCTAAAGCTTCAAAGATTGAACTTGAAGAATTATCAAAATAA
Upstream 100 bases:
>100_bases TCTTACGTTAAAAAGTAGAAGATAAATAAGATTATTTGCATAAAATTTCGAACATCTCCCCTTTGCAAAATTTATTAGTT TATTTAATTTATAAACACAT
Downstream 100 bases:
>100_bases ATAATTAAAAAAGTTTATAATTTTTGTTATACTAAAACGTATGTATTGTAACCTTGTTCCGGTATGTAGTATATTTGGGG ATATTTATTATTACCTTGAC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSIAGRIERLPWTSFHTRLLALLTLGEFFELYDLFTGGFVASQVASFFKVSSATGIYYTVAIFFLGAFVGAIIFNYIGDS VGRRTALIINMAITSIALLLIPFSPNILTFGILRFIAGVGVGPEAILVLDVLITEFFPSTVRGRALAIGYTAAWTAPIVV AILAYLLLPHKYILYGWQWLFIIGGLGILTIIPFRFLIPESPRWLESKGRLDEAEKIVRRMEEIAIKEKGQLGEPLQVQV ITSQRVTISELFSPLYRKRTIMLWVFEFLQAGVYYGFASLAPSVLFAKGFTLVHTLQYTMIIYTSYFISSLASIFIIDSQ KFDRKWQVSIVMLLMGLVGLAFGFSSSPLEAVATGFTFGFLSNIFSNAFHQYGAELYPTRVRAFADGVQYSLSRLGNYIW LTLLPIVLYSNGPIAMYTVVFIMALIVTLDVAILGPKASKIELEELSK
Sequences:
>Translated_448_residues MSIAGRIERLPWTSFHTRLLALLTLGEFFELYDLFTGGFVASQVASFFKVSSATGIYYTVAIFFLGAFVGAIIFNYIGDS VGRRTALIINMAITSIALLLIPFSPNILTFGILRFIAGVGVGPEAILVLDVLITEFFPSTVRGRALAIGYTAAWTAPIVV AILAYLLLPHKYILYGWQWLFIIGGLGILTIIPFRFLIPESPRWLESKGRLDEAEKIVRRMEEIAIKEKGQLGEPLQVQV ITSQRVTISELFSPLYRKRTIMLWVFEFLQAGVYYGFASLAPSVLFAKGFTLVHTLQYTMIIYTSYFISSLASIFIIDSQ KFDRKWQVSIVMLLMGLVGLAFGFSSSPLEAVATGFTFGFLSNIFSNAFHQYGAELYPTRVRAFADGVQYSLSRLGNYIW LTLLPIVLYSNGPIAMYTVVFIMALIVTLDVAILGPKASKIELEELSK >Mature_447_residues SIAGRIERLPWTSFHTRLLALLTLGEFFELYDLFTGGFVASQVASFFKVSSATGIYYTVAIFFLGAFVGAIIFNYIGDSV GRRTALIINMAITSIALLLIPFSPNILTFGILRFIAGVGVGPEAILVLDVLITEFFPSTVRGRALAIGYTAAWTAPIVVA ILAYLLLPHKYILYGWQWLFIIGGLGILTIIPFRFLIPESPRWLESKGRLDEAEKIVRRMEEIAIKEKGQLGEPLQVQVI TSQRVTISELFSPLYRKRTIMLWVFEFLQAGVYYGFASLAPSVLFAKGFTLVHTLQYTMIIYTSYFISSLASIFIIDSQK FDRKWQVSIVMLLMGLVGLAFGFSSSPLEAVATGFTFGFLSNIFSNAFHQYGAELYPTRVRAFADGVQYSLSRLGNYIWL TLLPIVLYSNGPIAMYTVVFIMALIVTLDVAILGPKASKIELEELSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI166197673, Length=369, Percent_Identity=30.0813008130081, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI213021148, Length=428, Percent_Identity=23.8317757009346, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI4507005, Length=352, Percent_Identity=26.9886363636364, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4506999, Length=410, Percent_Identity=27.5609756097561, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI24308167, Length=420, Percent_Identity=23.5714285714286, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI302148518, Length=351, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI166064021, Length=374, Percent_Identity=25.4010695187166, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI23510410, Length=219, Percent_Identity=30.5936073059361, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI24497476, Length=386, Percent_Identity=24.0932642487047, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI20070188, Length=386, Percent_Identity=24.0932642487047, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24497490, Length=359, Percent_Identity=27.5766016713092, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI216548223, Length=264, Percent_Identity=23.8636363636364, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI262399383, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI7662270, Length=265, Percent_Identity=24.9056603773585, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI24497478, Length=339, Percent_Identity=24.188790560472, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI24497480, Length=339, Percent_Identity=24.188790560472, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI148664184, Length=395, Percent_Identity=24.3037974683544, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI73695465, Length=200, Percent_Identity=26, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1788074, Length=406, Percent_Identity=28.3251231527094, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1788068, Length=457, Percent_Identity=25.8205689277899, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1786229, Length=423, Percent_Identity=26.9503546099291, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082159, Length=414, Percent_Identity=27.2946859903382, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789312, Length=424, Percent_Identity=21.2264150943396, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789207, Length=424, Percent_Identity=23.1132075471698, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI1790463, Length=335, Percent_Identity=25.0746268656716, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI25145172, Length=384, Percent_Identity=24.21875, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32564663, Length=450, Percent_Identity=22, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71986689, Length=379, Percent_Identity=21.8997361477573, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202825, Length=378, Percent_Identity=21.957671957672, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193209133, Length=432, Percent_Identity=22.9166666666667, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6322242, Length=336, Percent_Identity=25.8928571428571, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324417, Length=336, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI221330907, Length=345, Percent_Identity=28.4057971014493, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI21355657, Length=345, Percent_Identity=25.2173913043478, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24648211, Length=349, Percent_Identity=26.3610315186246, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24649618, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24640198, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24640196, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24640200, Length=221, Percent_Identity=28.0542986425339, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585484, Length=386, Percent_Identity=24.3523316062176, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI20129657, Length=386, Percent_Identity=24.3523316062176, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24649616, Length=251, Percent_Identity=24.7011952191235, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24658792, Length=388, Percent_Identity=22.1649484536082, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49906; Mature: 49774
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAGRIERLPWTSFHTRLLALLTLGEFFELYDLFTGGFVASQVASFFKVSSATGIYYTV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHH AIFFLGAFVGAIIFNYIGDSVGRRTALIINMAITSIALLLIPFSPNILTFGILRFIAGVG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VGPEAILVLDVLITEFFPSTVRGRALAIGYTAAWTAPIVVAILAYLLLPHKYILYGWQWL CCHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FIIGGLGILTIIPFRFLIPESPRWLESKGRLDEAEKIVRRMEEIAIKEKGQLGEPLQVQV HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE ITSQRVTISELFSPLYRKRTIMLWVFEFLQAGVYYGFASLAPSVLFAKGFTLVHTLQYTM ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IIYTSYFISSLASIFIIDSQKFDRKWQVSIVMLLMGLVGLAFGFSSSPLEAVATGFTFGF HHHHHHHHHHHHHEEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LSNIFSNAFHQYGAELYPTRVRAFADGVQYSLSRLGNYIWLTLLPIVLYSNGPIAMYTVV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIMALIVTLDVAILGPKASKIELEELSK HHHHHHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure SIAGRIERLPWTSFHTRLLALLTLGEFFELYDLFTGGFVASQVASFFKVSSATGIYYTV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHH AIFFLGAFVGAIIFNYIGDSVGRRTALIINMAITSIALLLIPFSPNILTFGILRFIAGVG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC VGPEAILVLDVLITEFFPSTVRGRALAIGYTAAWTAPIVVAILAYLLLPHKYILYGWQWL CCHHHHHHHHHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FIIGGLGILTIIPFRFLIPESPRWLESKGRLDEAEKIVRRMEEIAIKEKGQLGEPLQVQV HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE ITSQRVTISELFSPLYRKRTIMLWVFEFLQAGVYYGFASLAPSVLFAKGFTLVHTLQYTM ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IIYTSYFISSLASIFIIDSQKFDRKWQVSIVMLLMGLVGLAFGFSSSPLEAVATGFTFGF HHHHHHHHHHHHHEEEECCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LSNIFSNAFHQYGAELYPTRVRAFADGVQYSLSRLGNYIWLTLLPIVLYSNGPIAMYTVV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIMALIVTLDVAILGPKASKIELEELSK HHHHHHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]