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The map label for this gene is glcF [H]

Identifier: 227828462

GI number: 227828462

Start: 2021210

End: 2022244

Strand: Direct

Name: glcF [H]

Synonym: M1425_2210

Alternate gene names: 227828462

Gene position: 2021210-2022244 (Clockwise)

Preceding gene: 227828461

Following gene: 227828466

Centisome position: 77.48

GC content: 34.69

Gene sequence:

>1035_bases
ATGATCTCATCTTTGAAATTAACTGAAATGTGTACCCATTGTGGATTTTGTCTAGAAACTTGCCCAACTTATGTTGTAAC
TAGAAACGAAGTTCACTCACCAAGGGGTAGAATTGAGGCCGTAAGGCTTGGAATAAACAGTGTTGGAATTGAGACGTGTA
TGTATTGTAGATTATGCGAAACTGCTTGTCCAGCAGGCGTTAAATACGGTCAAATTATCACGCCAGTTAGGAAAAGCTCC
ACAAAGAAAACCCTAATGGAAAAGATGTTAGAGAACCCAAAATTGCTAAGCAAGTCATTAAAACTGTTAGATAAGGTAAG
TAGCTATCCAGAGGCGGAAAGGTTTATGAAATTCATTAAACCTAATGAGATCTCAGAACCATTAGAAACTAATGATGAGG
GGGACATAATATTATTTCCTGGTTGTATAGAATCCGTTATATTTAGAAGAACTGTTGAAAAGGCTTACAAATTCTTAAGT
AAAAATTATAAGATAAAAATTATTAATGGATGTTGTGGTTTAGCTCACATAAGTAATGGAAATCATGAAGGGGCTAGAAA
GTTAGCAATGAAACTTGCTGAAAAGGTTAAGGGTAAAAAGGTCATAACATTACAGTCTAATTGTGCTGCATTTATGAAGG
AGTATAAGGAATGGTTTGGTATAGAAATCAATTCATATGATTTTGCAGAATTTTTAATCAAAGAAGGCATAGAATTACCT
AAGGTTAGTGATACATTTACTATTCACTATCCTTGTCATGCATATAGGCAAAAGCTAACTACGCATATTCGTAATGCCGT
CGAGAAAATGGGGGTTAAAATAAGTGAAATGGAAGATCCGCATTTTGAATGTGGTGCTGGTGGAGACTATTGGATATCTC
ATCCTAAGCTGTCTGATATGGTAATAAACGTTAAGAAGGAAAAGATAGCTAAAAGTAAAGCTAAAAAGGTTATTGTAACA
AATAGCGTTTGTGCATTAGCCATAAGGTCAATGGGTTATGATGTATATCATATTGCTGACTTATTGGATACCTAA

Upstream 100 bases:

>100_bases
CCAAGAGACTTCTAAATCCATGTAAGTTAGTCCCCCCAGCTAAGAATGAAATATGTAATACCGTTAATAGGGTGCATACT
TACTTGTTGGAGGGAGATAT

Downstream 100 bases:

>100_bases
TAAATTCCATCTCTCGTTAGAATATTTTTCCTTGTAAAGTCTATTAGCTAATTTTATTTCGTTCGGAGTTAGACTCCCCA
TAAATACGTCTTTTTCATTT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MISSLKLTEMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINSVGIETCMYCRLCETACPAGVKYGQIITPVRKSS
TKKTLMEKMLENPKLLSKSLKLLDKVSSYPEAERFMKFIKPNEISEPLETNDEGDIILFPGCIESVIFRRTVEKAYKFLS
KNYKIKIINGCCGLAHISNGNHEGARKLAMKLAEKVKGKKVITLQSNCAAFMKEYKEWFGIEINSYDFAEFLIKEGIELP
KVSDTFTIHYPCHAYRQKLTTHIRNAVEKMGVKISEMEDPHFECGAGGDYWISHPKLSDMVINVKKEKIAKSKAKKVIVT
NSVCALAIRSMGYDVYHIADLLDT

Sequences:

>Translated_344_residues
MISSLKLTEMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINSVGIETCMYCRLCETACPAGVKYGQIITPVRKSS
TKKTLMEKMLENPKLLSKSLKLLDKVSSYPEAERFMKFIKPNEISEPLETNDEGDIILFPGCIESVIFRRTVEKAYKFLS
KNYKIKIINGCCGLAHISNGNHEGARKLAMKLAEKVKGKKVITLQSNCAAFMKEYKEWFGIEINSYDFAEFLIKEGIELP
KVSDTFTIHYPCHAYRQKLTTHIRNAVEKMGVKISEMEDPHFECGAGGDYWISHPKLSDMVINVKKEKIAKSKAKKVIVT
NSVCALAIRSMGYDVYHIADLLDT
>Mature_344_residues
MISSLKLTEMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINSVGIETCMYCRLCETACPAGVKYGQIITPVRKSS
TKKTLMEKMLENPKLLSKSLKLLDKVSSYPEAERFMKFIKPNEISEPLETNDEGDIILFPGCIESVIFRRTVEKAYKFLS
KNYKIKIINGCCGLAHISNGNHEGARKLAMKLAEKVKGKKVITLQSNCAAFMKEYKEWFGIEINSYDFAEFLIKEGIELP
KVSDTFTIHYPCHAYRQKLTTHIRNAVEKMGVKISEMEDPHFECGAGGDYWISHPKLSDMVINVKKEKIAKSKAKKVIVT
NSVCALAIRSMGYDVYHIADLLDT

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=369, Percent_Identity=24.390243902439, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 38832; Mature: 38832

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSLKLTEMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINSVGIETCMYCRLCE
CCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEHHEECHHHHHHHHHHHHHHHH
TACPAGVKYGQIITPVRKSSTKKTLMEKMLENPKLLSKSLKLLDKVSSYPEAERFMKFIK
HHCCCCCCCCHHCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PNEISEPLETNDEGDIILFPGCIESVIFRRTVEKAYKFLSKNYKIKIINGCCGLAHISNG
CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCC
NHEGARKLAMKLAEKVKGKKVITLQSNCAAFMKEYKEWFGIEINSYDFAEFLIKEGIELP
CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCEECCHHHHHHHHHCCCCCC
KVSDTFTIHYPCHAYRQKLTTHIRNAVEKMGVKISEMEDPHFECGAGGDYWISHPKLSDM
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEECCCCHHHH
VINVKKEKIAKSKAKKVIVTNSVCALAIRSMGYDVYHIADLLDT
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MISSLKLTEMCTHCGFCLETCPTYVVTRNEVHSPRGRIEAVRLGINSVGIETCMYCRLCE
CCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEHHEECHHHHHHHHHHHHHHHH
TACPAGVKYGQIITPVRKSSTKKTLMEKMLENPKLLSKSLKLLDKVSSYPEAERFMKFIK
HHCCCCCCCCHHCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PNEISEPLETNDEGDIILFPGCIESVIFRRTVEKAYKFLSKNYKIKIINGCCGLAHISNG
CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCC
NHEGARKLAMKLAEKVKGKKVITLQSNCAAFMKEYKEWFGIEINSYDFAEFLIKEGIELP
CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCEECCHHHHHHHHHCCCCCC
KVSDTFTIHYPCHAYRQKLTTHIRNAVEKMGVKISEMEDPHFECGAGGDYWISHPKLSDM
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEECCCCHHHH
VINVKKEKIAKSKAKKVIVTNSVCALAIRSMGYDVYHIADLLDT
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]