| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227828432
Identifier: 227828432
GI number: 227828432
Start: 1998010
End: 1998402
Strand: Direct
Name: 227828432
Synonym: M1425_2178
Alternate gene names: NA
Gene position: 1998010-1998402 (Clockwise)
Preceding gene: 227828431
Following gene: 227828434
Centisome position: 76.59
GC content: 34.86
Gene sequence:
>393_bases ATGAAAGTAGTTGTAGCATATGATGGTTCAGATCATGCTAAAAATGCCTTATTTTTTGCATTAAATCTAATTAAAAAGGA AGACGAAATACACCTAGTTACAATAGTAAAAGAAGCACCCAGAAGTCCAGAACAAGTCATAATACAGAGTGAGCAAAGGG CAAAGCAAATGCAAGATGAGGTAGTAAGTGAACTTAGCGATTATAAGATAGTGCAAAAAATTTTGGAAAGTAATGACGTA GCTGACTCAATATTACAGTACTGTAATAATATAGGATGCGGTCTAATTGTAACTGGTAGTAGAGGGCTTACAGGGATTAA GAAGGCCATATTGGGAAGTGTGTCGAATGCTTTAGTTTCAAAGTCCAATGTTCCAGTTTTAGTCGTTAAATAA
Upstream 100 bases:
>100_bases AATATATTTCTTAACGGTTAACTTACCCATCTTATTTCTACAAACTTTTTAATATCTATGATAGGAATTTTTAAAATAGT GTAGATAGAGAATTATCTAT
Downstream 100 bases:
>100_bases GCTCCTTAAATAGTATTTATATCTTGGTCCTTAAATAGTATTTATATCTTGGAATAGAAAAACTCCTTTACTTCCTTACT AGTTGGCCTTTTATTAGGAT
Product: UspA domain protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKVVVAYDGSDHAKNALFFALNLIKKEDEIHLVTIVKEAPRSPEQVIIQSEQRAKQMQDEVVSELSDYKIVQKILESNDV ADSILQYCNNIGCGLIVTGSRGLTGIKKAILGSVSNALVSKSNVPVLVVK
Sequences:
>Translated_130_residues MKVVVAYDGSDHAKNALFFALNLIKKEDEIHLVTIVKEAPRSPEQVIIQSEQRAKQMQDEVVSELSDYKIVQKILESNDV ADSILQYCNNIGCGLIVTGSRGLTGIKKAILGSVSNALVSKSNVPVLVVK >Mature_130_residues MKVVVAYDGSDHAKNALFFALNLIKKEDEIHLVTIVKEAPRSPEQVIIQSEQRAKQMQDEVVSELSDYKIVQKILESNDV ADSILQYCNNIGCGLIVTGSRGLTGIKKAILGSVSNALVSKSNVPVLVVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14166; Mature: 14166
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVVAYDGSDHAKNALFFALNLIKKEDEIHLVTIVKEAPRSPEQVIIQSEQRAKQMQDE CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHH VVSELSDYKIVQKILESNDVADSILQYCNNIGCGLIVTGSRGLTGIKKAILGSVSNALVS HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC KSNVPVLVVK CCCCCEEEEC >Mature Secondary Structure MKVVVAYDGSDHAKNALFFALNLIKKEDEIHLVTIVKEAPRSPEQVIIQSEQRAKQMQDE CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHH VVSELSDYKIVQKILESNDVADSILQYCNNIGCGLIVTGSRGLTGIKKAILGSVSNALVS HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC KSNVPVLVVK CCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA