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The map label for this gene is fni [H]

Identifier: 227828316

GI number: 227828316

Start: 1884981

End: 1886087

Strand: Direct

Name: fni [H]

Synonym: M1425_2057

Alternate gene names: 227828316

Gene position: 1884981-1886087 (Clockwise)

Preceding gene: 227828315

Following gene: 227828317

Centisome position: 72.25

GC content: 38.12

Gene sequence:

>1107_bases
ATGCCTGATATAGTAAATAGGAAAGTGGAGCACGTTGAAATTGCCGCTTTTGAAAATGTAGATGGCTTATCTTCATCAAC
GTTCTTAAATGATGTAATTTTAGTCCACCAAGGATTTCCCGGGATATCATTTAGTGAAATAAATACTAAGACAAAATTTT
TTAGGAAAGAGATAAGTGTGCCAATAATGGTAACTGGGATGACAGGTGGAAGGAATGAATTGGGAAGAATAAACAAGATT
ATAGCAGAGGTCACTGAAAAATTCGGAATACCAATGGGGGTAGGTAGTCAGAGAGTTGCGATAGAAAAGGCTGAGGCAAG
GGAAAGTTTTGCGATAGTTAGAAAGGTAGCTCCTACAATACCTATTATTGCTAATTTAGGGATGCCGCAACTAGTTAAAG
GATATGGGCTAAAGGAATTCCAAGACGCCATACAAATGATTGAAGCTGATGCAATAGCTGTTCATTTAAATCCAGCTCAA
GAAGTATTTCAACCAGAAGGTGAGCCTGAGTATCAGATTTATGCTCTAGAAAAACTGAGAGACATCTCTAAGGAGTTATC
TGTGCCGATTATAGTAAAGGAAAGCGGCAACGGCATTTCCATGGAAACTGCAAAACTTCTTTACAGTTATGGTATAAAGA
ATTTTGACACTTCTGGACAAGGCGGTACTAATTGGATAGCAATTGAGATGATAAGGGATATTAGAAGAGGGAACTGGAAG
GCAGAGAGTGCAAAAAATTTTCTGGATTGGGGTGTACCAACTGCGGCGTCGATAATGGAAGTGAGATATTCAGTTCCAGA
TTCCTTTCTAGTGGGTAGTGGAGGCATTAGGAGTGGGTTAGATGCAGCTAAGGCTATAGCCTTAGGTGCTGATATTGCTG
GTATGGCATTACCAGTGTTAAAAAGTGCTATAGAAGGTAAGGAAAGTTTAGAACAATTCTTTAGAAAGATAATATTTGAA
TTGAAGGCTGCCATGATGCTTACTGGTTCTAAAGACGTTAATGCGTTAAAGAAGACCAGTATTGTTATTTTAGGTAAACT
TAAAGAGTGGGCAGAATATAGGGGGATAAATTTATCTACATACGATAAAGTTAGAAAGAGAGAATAA

Upstream 100 bases:

>100_bases
AACAATTTAAATGCTATGATTTTTGATGGAAGTAAAGCTGGAAATATATATTTAGCATTAAAGGGATATAATATAGGTAC
TTTGGTAAGAGGTAATCCGA

Downstream 100 bases:

>100_bases
AATGAGTGACGAATTAAGTTCGTATTTTAATGATATAGTTAACAATGTAAATTTTCATATAAAAAATTTTGTAAAGAGCA
ATGTTAGAACGCTTGAGGAA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPDIVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIMVTGMTGGRNELGRINKI
IAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQ
EVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWK
AESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFE
LKAAMMLTGSKDVNALKKTSIVILGKLKEWAEYRGINLSTYDKVRKRE

Sequences:

>Translated_368_residues
MPDIVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIMVTGMTGGRNELGRINKI
IAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQ
EVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWK
AESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFE
LKAAMMLTGSKDVNALKKTSIVILGKLKEWAEYRGINLSTYDKVRKRE
>Mature_367_residues
PDIVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPIMVTGMTGGRNELGRINKII
AEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQE
VFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKA
ESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFEL
KAAMMLTGSKDVNALKKTSIVILGKLKEWAEYRGINLSTYDKVRKRE

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 40444; Mature: 40313

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISV
CCCHHHCCHHEEEEEEECCCCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PIMVTGMTGGRNELGRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTI
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC
PIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLR
CHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCCCEEEEHHHHHH
DISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWK
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
AESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVL
CHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHH
KSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVILGKLKEWAEYRGINLST
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECHHHHHHHCCCCCHH
YDKVRKRE
HHHHHCCC
>Mature Secondary Structure 
PDIVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISV
CCHHHCCHHEEEEEEECCCCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PIMVTGMTGGRNELGRINKIIAEVTEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTI
CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC
PIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLR
CHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCCCEEEEHHHHHH
DISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWK
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
AESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVL
CHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHH
KSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVNALKKTSIVILGKLKEWAEYRGINLST
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECHHHHHHHCCCCCHH
YDKVRKRE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA