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The map label for this gene is ydaM [H]

Identifier: 227828271

GI number: 227828271

Start: 1844287

End: 1845660

Strand: Direct

Name: ydaM [H]

Synonym: M1425_2012

Alternate gene names: 227828271

Gene position: 1844287-1845660 (Clockwise)

Preceding gene: 227828270

Following gene: 227828272

Centisome position: 70.69

GC content: 33.55

Gene sequence:

>1374_bases
ATGCTTAACTTATTACTTAATCTGGCTATATTTATAGTACCTTCTCTAGTGGTTTGGAATCAGATAATTTTCTATATCTA
TGGTAAGAATTACAATGCAGTTAATTTAATTCTACACGATAACGGGATTAATTTACCTAAACTATCAATTATAGTACCGA
CGAAAGGTGAACGAATAGATGTGATTCAAGGGCTAATTAATAATATATATGAGGCTAGATGGGATAAAAACAAGCTAGAG
ATAATAATCGTATCTGATGATGATCAAGCATATTTTGATAAATTATTATCAACATTAATTATTCCTCCAGGGTTAGATGT
AAAGATATTCAGAAGAGAAAAGAGACTTGGCTATAAAAGTGGTGCATTAGCATTTGGCTTGCAGAAAAGTACTGGTGATT
TAATTCTAACATTAGATGTTGACGCTAGGATTGAAAAAGATTCGTTAATAAGAGCTTACAATCATATGGTGAATTTAGGC
TGTGATGCAGTTACTATGGAATGGCATGGTTACTCTAACATTAGCACATCTCTAGCAAGAGCGTTAATGGTGTCAACAGT
ACTTACTAGTAGATCTATACTGAGAGGAAGAGACAAATTAGGATTAAAAGTATTGCCAATAGGATGTGGAACGATCTTTA
AGCGTAATGCATTAGAGGCGGTAAACGGATGGGACTATACTATGGTTCAAGATGATTATGAACTTGGAACCAGACTTATA
AATAGAGGATTTAGGATTTGCGCATCTTCATCCCCAGTTTATGTGGAAGTTCCAGACAATCTAATAGCATTTTACGTACA
GCAGACTAGGTGGGCGATGGGGACGATGGAGGTTCTTTCTAGGAGGTTCAAATATATCGTAAGTAGTAATATAAAAATTT
TGCAAAAAATAGAGATTATAGCTTATCTTTCTCAGTACATCCCAATTATACTAACTTTTATAAGTGCTACTGTTTTTGGA
ATAGCTGGTTTTCTAGGTATTAGGCTTAGTATGAGTTTGCCAATGTTTGTCATATGGGCTATAACATTATCAGTTTATGC
TATTATTTTTGTAAATAGTTCAAAGAGGTCAGGGTTAGATACTATAACAGCAATAAACGCGCTGGGAAGATTATCTGCTT
ATACCGTTGGAATTTCGCCATTTTTACTTGTTGGTACTCTTAACGCATTTAAGAAGACTAGAACATATATTGTTACTCCA
AAAGGTAAGAAGGCTAAGAGTAACATAGGATATCCAATTTTAGCCTTTGGAATATTCTTCCTTTTATCGGCTTTCCTTTA
TATGTTTAGAGGCGACTTTCTAACCTTTATTTGGCTAGCTTACTATTCAATAGCTTTCCTTTATACTTTTATAGCATATA
TTAAAGGATTATGA

Upstream 100 bases:

>100_bases
GAAGATGTTATAAGTATTGCTAATAGGGGCTTAAGATTTCCACCTAAGACAACAAGACACGTATATGAATTTATTATTCC
CCAAAAGGCAATATCAATAG

Downstream 100 bases:

>100_bases
AAGAAGTATTTTTTAAATCATATTCTTAAAGGGACTACAAGTTGAGTAGTACCTACTTTTACGCCGATGAAGAAATATAT
AACTTACTTAGACCATATGT

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MLNLLLNLAIFIVPSLVVWNQIIFYIYGKNYNAVNLILHDNGINLPKLSIIVPTKGERIDVIQGLINNIYEARWDKNKLE
IIIVSDDDQAYFDKLLSTLIIPPGLDVKIFRREKRLGYKSGALAFGLQKSTGDLILTLDVDARIEKDSLIRAYNHMVNLG
CDAVTMEWHGYSNISTSLARALMVSTVLTSRSILRGRDKLGLKVLPIGCGTIFKRNALEAVNGWDYTMVQDDYELGTRLI
NRGFRICASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLSRRFKYIVSSNIKILQKIEIIAYLSQYIPIILTFISATVFG
IAGFLGIRLSMSLPMFVIWAITLSVYAIIFVNSSKRSGLDTITAINALGRLSAYTVGISPFLLVGTLNAFKKTRTYIVTP
KGKKAKSNIGYPILAFGIFFLLSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL

Sequences:

>Translated_457_residues
MLNLLLNLAIFIVPSLVVWNQIIFYIYGKNYNAVNLILHDNGINLPKLSIIVPTKGERIDVIQGLINNIYEARWDKNKLE
IIIVSDDDQAYFDKLLSTLIIPPGLDVKIFRREKRLGYKSGALAFGLQKSTGDLILTLDVDARIEKDSLIRAYNHMVNLG
CDAVTMEWHGYSNISTSLARALMVSTVLTSRSILRGRDKLGLKVLPIGCGTIFKRNALEAVNGWDYTMVQDDYELGTRLI
NRGFRICASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLSRRFKYIVSSNIKILQKIEIIAYLSQYIPIILTFISATVFG
IAGFLGIRLSMSLPMFVIWAITLSVYAIIFVNSSKRSGLDTITAINALGRLSAYTVGISPFLLVGTLNAFKKTRTYIVTP
KGKKAKSNIGYPILAFGIFFLLSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL
>Mature_457_residues
MLNLLLNLAIFIVPSLVVWNQIIFYIYGKNYNAVNLILHDNGINLPKLSIIVPTKGERIDVIQGLINNIYEARWDKNKLE
IIIVSDDDQAYFDKLLSTLIIPPGLDVKIFRREKRLGYKSGALAFGLQKSTGDLILTLDVDARIEKDSLIRAYNHMVNLG
CDAVTMEWHGYSNISTSLARALMVSTVLTSRSILRGRDKLGLKVLPIGCGTIFKRNALEAVNGWDYTMVQDDYELGTRLI
NRGFRICASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLSRRFKYIVSSNIKILQKIEIIAYLSQYIPIILTFISATVFG
IAGFLGIRLSMSLPMFVIWAITLSVYAIIFVNSSKRSGLDTITAINALGRLSAYTVGISPFLLVGTLNAFKKTRTYIVTP
KGKKAKSNIGYPILAFGIFFLLSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 51457; Mature: 51457

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLLLNLAIFIVPSLVVWNQIIFYIYGKNYNAVNLILHDNGINLPKLSIIVPTKGERID
CHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHH
VIQGLINNIYEARWDKNKLEIIIVSDDDQAYFDKLLSTLIIPPGLDVKIFRREKRLGYKS
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCC
GALAFGLQKSTGDLILTLDVDARIEKDSLIRAYNHMVNLGCDAVTMEWHGYSNISTSLAR
CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
ALMVSTVLTSRSILRGRDKLGLKVLPIGCGTIFKRNALEAVNGWDYTMVQDDYELGTRLI
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCEEEECCHHHHHHHHH
NRGFRICASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLSRRFKYIVSSNIKILQKIEII
HCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AYLSQYIPIILTFISATVFGIAGFLGIRLSMSLPMFVIWAITLSVYAIIFVNSSKRSGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCCH
TITAINALGRLSAYTVGISPFLLVGTLNAFKKTRTYIVTPKGKKAKSNIGYPILAFGIFF
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHH
LLSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNLLLNLAIFIVPSLVVWNQIIFYIYGKNYNAVNLILHDNGINLPKLSIIVPTKGERID
CHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHH
VIQGLINNIYEARWDKNKLEIIIVSDDDQAYFDKLLSTLIIPPGLDVKIFRREKRLGYKS
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCC
GALAFGLQKSTGDLILTLDVDARIEKDSLIRAYNHMVNLGCDAVTMEWHGYSNISTSLAR
CCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
ALMVSTVLTSRSILRGRDKLGLKVLPIGCGTIFKRNALEAVNGWDYTMVQDDYELGTRLI
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCEEEECCHHHHHHHHH
NRGFRICASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLSRRFKYIVSSNIKILQKIEII
HCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AYLSQYIPIILTFISATVFGIAGFLGIRLSMSLPMFVIWAITLSVYAIIFVNSSKRSGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCCH
TITAINALGRLSAYTVGISPFLLVGTLNAFKKTRTYIVTPKGKKAKSNIGYPILAFGIFF
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHH
LLSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]