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The map label for this gene is 227828139

Identifier: 227828139

GI number: 227828139

Start: 1720768

End: 1721130

Strand: Direct

Name: 227828139

Synonym: M1425_1877

Alternate gene names: NA

Gene position: 1720768-1721130 (Clockwise)

Preceding gene: 227828136

Following gene: 227828140

Centisome position: 65.96

GC content: 28.37

Gene sequence:

>363_bases
GTGTCTTCAAATCAAACAAATAGGCATCTTCTATTGAAAGCTAGAAGAGTAGTTAAAGAAGGAAGATTTGTAAGTCTATC
TCTTAAAGGTACTTTGTTCACGATTTTTATTTATATTGGACGTAATAACGATTACACCCTTAATCTTAATTACTGTAGTT
GTCCATTTTATTTATTCAATGTACTTTTAAGAAACAAGTATGACTTTTGCTATCATACTTTAGGTTTAAAATATGCATTA
GAGAAGGATCAATTAACAAAAATTGAGTTATATACAGAGGATTTTAAAGAAATTTTAACCGAGATATACACTTGTGGAAA
ATCTTTAAAACTGAGAAGAATATTGAGCAATGTGGAGAGTTGA

Upstream 100 bases:

>100_bases
GAAATTCTGCCACGATCTAAACAATTTAGCAATCGACTAGCGATAGTGAAACTGATTATTAGATAAATTATTAATCCTTA
GACGGGATAAAGAAGTATAA

Downstream 100 bases:

>100_bases
CTTTGAACGATGTGCAGTTAGTATTTATATCTGGGATTTTGATATTGGCATTTATAATAATTTATATAATATTAATGGAA
TTTCCAATAAAGTCTTCAAG

Product: zinc finger SWIM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSSNQTNRHLLLKARRVVKEGRFVSLSLKGTLFTIFIYIGRNNDYTLNLNYCSCPFYLFNVLLRNKYDFCYHTLGLKYAL
EKDQLTKIELYTEDFKEILTEIYTCGKSLKLRRILSNVES

Sequences:

>Translated_120_residues
MSSNQTNRHLLLKARRVVKEGRFVSLSLKGTLFTIFIYIGRNNDYTLNLNYCSCPFYLFNVLLRNKYDFCYHTLGLKYAL
EKDQLTKIELYTEDFKEILTEIYTCGKSLKLRRILSNVES
>Mature_119_residues
SSNQTNRHLLLKARRVVKEGRFVSLSLKGTLFTIFIYIGRNNDYTLNLNYCSCPFYLFNVLLRNKYDFCYHTLGLKYALE
KDQLTKIELYTEDFKEILTEIYTCGKSLKLRRILSNVES

Specific function: Unknown

COG id: COG5431

COG function: function code S; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14196; Mature: 14065

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNQTNRHLLLKARRVVKEGRFVSLSLKGTLFTIFIYIGRNNDYTLNLNYCSCPFYLFN
CCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEECCHHHHHH
VLLRNKYDFCYHTLGLKYALEKDQLTKIELYTEDFKEILTEIYTCGKSLKLRRILSNVES
HHHHCCCHHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SSNQTNRHLLLKARRVVKEGRFVSLSLKGTLFTIFIYIGRNNDYTLNLNYCSCPFYLFN
CCCCCCHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEECCHHHHHH
VLLRNKYDFCYHTLGLKYALEKDQLTKIELYTEDFKEILTEIYTCGKSLKLRRILSNVES
HHHHCCCHHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA