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The map label for this gene is 227828118

Identifier: 227828118

GI number: 227828118

Start: 1705103

End: 1705543

Strand: Direct

Name: 227828118

Synonym: M1425_1856

Alternate gene names: NA

Gene position: 1705103-1705543 (Clockwise)

Preceding gene: 227828116

Following gene: 227828119

Centisome position: 65.36

GC content: 30.16

Gene sequence:

>441_bases
ATGAGTAGTGGAAGAAGAATCTCGAGCGAATTGAATAACCTAATAGATAAGACTATTATTGTAAAAACAACTAATGGAAA
AACGTATACTGGTCAACTTTATGCATATGAACTTTCGCCATTTATTATTAGTTTAACAAATGTTAAAGATGATAATAATA
ACACTTTCTATAAGTTAATGATAAATGGAAATACAATTTCTGAGATAATAATTAAGAATCCTCCTCTATTTGAGCCAAGA
GAGTTTGCAGAATTAGTTGAAAAATCCTTAAATTTAAGGCCAGCTGATATAAAAGTTTACGAAGAGACAGGAGTAGTGAC
AATTCTGGAGAGAATTAAAGTATCACAAAATGGAGTAGAAGGAAGTGGGCCAATGGCCCAAAGAATTTACGATCTATACA
ACGATTATATAAATAAAAAGAAAAAGGAATTAGGTCTATGA

Upstream 100 bases:

>100_bases
AATACTATTTATTTCACAACTTAGAATTATTTCTTGTGCCTTTGATTCCATCATATTACTATTTAAGTTTTAATTTATTA
ACGTTATTGGGGACTATAAT

Downstream 100 bases:

>100_bases
CCGTATTTGAAGTGAAATACGAAGATTTGGCAGGAAGAATAGGAATCTTAAAAACAAGAAGCGGTAACTTAGAAACTCCA
GTATTCTTTCCAGTAATTAA

Product: Like-Sm ribonucleoprotein core

Products: NA

Alternate protein names: Small Nuclear Ribonucleoprotein Homolog; Sm Ribonucleoprotein Core-Like Protein; Small Nuclear Ribonucleoprotein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSSGRRISSELNNLIDKTIIVKTTNGKTYTGQLYAYELSPFIISLTNVKDDNNNTFYKLMINGNTISEIIIKNPPLFEPR
EFAELVEKSLNLRPADIKVYEETGVVTILERIKVSQNGVEGSGPMAQRIYDLYNDYINKKKKELGL

Sequences:

>Translated_146_residues
MSSGRRISSELNNLIDKTIIVKTTNGKTYTGQLYAYELSPFIISLTNVKDDNNNTFYKLMINGNTISEIIIKNPPLFEPR
EFAELVEKSLNLRPADIKVYEETGVVTILERIKVSQNGVEGSGPMAQRIYDLYNDYINKKKKELGL
>Mature_145_residues
SSGRRISSELNNLIDKTIIVKTTNGKTYTGQLYAYELSPFIISLTNVKDDNNNTFYKLMINGNTISEIIIKNPPLFEPRE
FAELVEKSLNLRPADIKVYEETGVVTILERIKVSQNGVEGSGPMAQRIYDLYNDYINKKKKELGL

Specific function: Unknown

COG id: COG1958

COG function: function code K; Small nuclear ribonucleoprotein (snRNP) homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16581; Mature: 16450

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGRRISSELNNLIDKTIIVKTTNGKTYTGQLYAYELSPFIISLTNVKDDNNNTFYKLM
CCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEE
INGNTISEIIIKNPPLFEPREFAELVEKSLNLRPADIKVYEETGVVTILERIKVSQNGVE
ECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
GSGPMAQRIYDLYNDYINKKKKELGL
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSGRRISSELNNLIDKTIIVKTTNGKTYTGQLYAYELSPFIISLTNVKDDNNNTFYKLM
CCCCHHHHHHHHHHCCEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEE
INGNTISEIIIKNPPLFEPREFAELVEKSLNLRPADIKVYEETGVVTILERIKVSQNGVE
ECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
GSGPMAQRIYDLYNDYINKKKKELGL
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA