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The map label for this gene is yjjK [C]

Identifier: 227828106

GI number: 227828106

Start: 1694558

End: 1696366

Strand: Direct

Name: yjjK [C]

Synonym: M1425_1844

Alternate gene names: 227828106

Gene position: 1694558-1696366 (Clockwise)

Preceding gene: 227828105

Following gene: 227828107

Centisome position: 64.95

GC content: 33.67

Gene sequence:

>1809_bases
GTGTTCGTGAGAGTTGCCGTAATAAATTATGACTTTTGTAAGCCAGATAAATGTAACTTAGAATGTATAAACTTCTGTCC
TGTTGACAGATCTGGAGGAAAAGCAATAGAACTATCGGACATTGTTAAAGGGAAACCAGTAATTTATGAAGAAACCTGTA
TAGGTTGTGGAATATGTGTGAAGAAATGTCCATACGAAGCGATATCGATTGTAAACTTGCCAGACGAGTTGGAAGGGGAG
GTTATACACAGATACAAAGTAAATGGATTTAAATTGTTTGGCTTACCAACGCCTAAAAATAATACGATATTAGGAGTATT
AGGAAAGAATGGAGTAGGGAAAACTACAGTGCTTAAAATAGTGGCTGGTGAATTAATTCCGAATTTTGGTGATCCTAATT
CCAAATTAGGTAAGGATGAAGTATTAAAAAAGTTTAGAGGTAAGGAAATATATAATTATTTTAAGGAATTATATAATAAT
GGGCTAAAAATAATACATAAGATTCAATACGTTGAGTACGCTTCAAAATTCCTTAAAGGTACAGTAAACGAAATTTTGAC
AAAGATAGACGAAAGAGGGAAAAAAGATGAAGTTAAAGAACTTCTAAATATGGCTAATCTTTGGAATAAGGATGCTAATG
TACTTTCTGGAGGAGGTCTTCAACGATTATTAATAGCTGTTTCACTATTAAGAGAAGCAGATGTATATATATTTGACGAA
CCTTCCTCTTATCTAGACGTTAGGGAAAGAATGAATATGGCTAAAGCAATTAGAGAATTACTAAAGAATAAATATGTTAT
GGTTGTTGATCATGACTTGATAGTTTTAGATTATCTTACAGATCTGATACACATAATTTATGGAGAAAGTTCAGTATATG
GAAGGGTATCAAAATCTTATGCAGCGAGAGTTGGCATAAATAATTTTCTAAAAGGATATTTACCAGCGGAAAATATGAAA
ATAAGACCAGACGAAATAAGGTTTATGCTAAAAGAGATTAGTGATTTAGATCTCTCTAAAGATCTAAAAACAAAAATGAA
ATGGACTAAGATAATCAAGAAGTTAGGTGATTTTCAGCTAGTAGTAAATGAAGGAGAGGCTAAAGAGGGAGAAATAATCG
GAATTTTAGGACCAAACGGGATAGGAAAGACAACTTTTGCAAGAATATTAGTTGGTGAAATTTCAGCAGATGAAGGCTCT
GTAACTCCTGAAAAACAAATATTATCTTATAAACCACAACGAATTTTACCTAATTACGATGGAACTGTTCAACAGTACTT
AGAAAACGTAAGCAAAGATGCACTTTCTACGTCATCATGGTTCTTCGAAGAAGTAACTAAGAGACTTAACTTACATAGGT
TACTAGAGTCTAATGTGAATGATCTAAGTGGAGGTGAGTTACAGAAATTGTATATAGCAGCGACTTTAGCGAAAGAGGCT
GATCTTTATGTTTTAGATGAACCTTCTTCTTATCTTGATGTCGAAGAGAGGTATATCGTTGCTAAAGCTATAAAGAGAGT
TGTGAGAGAGAGAAAAGCAGTAACCTTTATCATAGATCATGATCTTTCAATACATGACTATATAGCGGATAGAATTATTG
TTTTCAAAGGAGAGCCAGAGAAAGCTGGATTTGCTACATCTCCAGTAACACTAAAAACGGGAATGAACGAATTTTTGAGA
GAATTAGAGGTAACGTTCAGAAGAGATGCTGAGACTGGAAGACCTAGAGTAAATAAAATCGGAAGTTACTTAGATAGGGT
CCAGAAAGAAAGAGGAGAGTATTACTCCATGGTTCTTTCTACCCAGTAA

Upstream 100 bases:

>100_bases
AAAATATTAAAAGTAGAGGAAGATTTATTAAATGACATAGAGGGTAATTTTATAGGATGTGAGTATTCTAACAACAAGTA
TATTTTTACATAGTAGGTGA

Downstream 100 bases:

>100_bases
GATTTTTAGTTATGTATATCTAAATTAAATTATGAAAACTACACTTAGTGTGATCAAAGCCGATATAGGAAGCCTAGCTG
GACATCATGTTGTTCATCCT

Product: ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MFVRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGE
VIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKIVAGELIPNFGDPNSKLGKDEVLKKFRGKEIYNYFKELYNN
GLKIIHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMANLWNKDANVLSGGGLQRLLIAVSLLREADVYIFDE
PSSYLDVRERMNMAKAIRELLKNKYVMVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMK
IRPDEIRFMLKEISDLDLSKDLKTKMKWTKIIKKLGDFQLVVNEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGS
VTPEKQILSYKPQRILPNYDGTVQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEA
DLYVLDEPSSYLDVEERYIVAKAIKRVVRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGFATSPVTLKTGMNEFLR
ELEVTFRRDAETGRPRVNKIGSYLDRVQKERGEYYSMVLSTQ

Sequences:

>Translated_602_residues
MFVRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGE
VIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKIVAGELIPNFGDPNSKLGKDEVLKKFRGKEIYNYFKELYNN
GLKIIHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMANLWNKDANVLSGGGLQRLLIAVSLLREADVYIFDE
PSSYLDVRERMNMAKAIRELLKNKYVMVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMK
IRPDEIRFMLKEISDLDLSKDLKTKMKWTKIIKKLGDFQLVVNEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGS
VTPEKQILSYKPQRILPNYDGTVQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEA
DLYVLDEPSSYLDVEERYIVAKAIKRVVRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGFATSPVTLKTGMNEFLR
ELEVTFRRDAETGRPRVNKIGSYLDRVQKERGEYYSMVLSTQ
>Mature_602_residues
MFVRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGE
VIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKIVAGELIPNFGDPNSKLGKDEVLKKFRGKEIYNYFKELYNN
GLKIIHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMANLWNKDANVLSGGGLQRLLIAVSLLREADVYIFDE
PSSYLDVRERMNMAKAIRELLKNKYVMVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMK
IRPDEIRFMLKEISDLDLSKDLKTKMKWTKIIKKLGDFQLVVNEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGS
VTPEKQILSYKPQRILPNYDGTVQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEA
DLYVLDEPSSYLDVEERYIVAKAIKRVVRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGFATSPVTLKTGMNEFLR
ELEVTFRRDAETGRPRVNKIGSYLDRVQKERGEYYSMVLSTQ

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=595, Percent_Identity=45.0420168067227, Blast_Score=521, Evalue=1e-148,
Organism=Homo sapiens, GI108773782, Length=595, Percent_Identity=45.0420168067227, Blast_Score=521, Evalue=1e-148,
Organism=Homo sapiens, GI27262624, Length=183, Percent_Identity=30.6010928961749, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI27262626, Length=183, Percent_Identity=30.6010928961749, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI1788506, Length=508, Percent_Identity=23.4251968503937, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788165, Length=182, Percent_Identity=29.1208791208791, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786345, Length=193, Percent_Identity=25.9067357512953, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=24.5689655172414, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788002, Length=193, Percent_Identity=28.4974093264249, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788225, Length=197, Percent_Identity=30.4568527918782, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48994997, Length=192, Percent_Identity=26.5625, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786803, Length=190, Percent_Identity=25.2631578947368, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=597, Percent_Identity=42.713567839196, Blast_Score=485, Evalue=1e-137,
Organism=Saccharomyces cerevisiae, GI6320296, Length=600, Percent_Identity=44.3333333333333, Blast_Score=511, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24661270, Length=594, Percent_Identity=42.7609427609428, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI21355589, Length=594, Percent_Identity=42.7609427609428, Blast_Score=501, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 68155; Mature: 68155

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00018 EF_HAND_1 ; PS00052 RIBOSOMAL_S7 ; PS00198 4FE4S_FERREDOXIN ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCCHHH
KKCPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKI
HHCCHHHEEEECCCCHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCHHHHHHH
VAGELIPNFGDPNSKLGKDEVLKKFRGKEIYNYFKELYNNGLKIIHKIQYVEYASKFLKG
HHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TVNEILTKIDERGKKDEVKELLNMANLWNKDANVLSGGGLQRLLIAVSLLREADVYIFDE
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEEC
PSSYLDVRERMNMAKAIRELLKNKYVMVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSY
CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
AARVGINNFLKGYLPAENMKIRPDEIRFMLKEISDLDLSKDLKTKMKWTKIIKKLGDFQL
HHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE
VVNEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGSVTPEKQILSYKPQRILPNYD
EEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHCCCCCC
GTVQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEA
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEHHHCCC
DLYVLDEPSSYLDVEERYIVAKAIKRVVRERKAVTFIIDHDLSIHDYIADRIIVFKGEPE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCEEEEEECCCC
KAGFATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGEYYSMVLS
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE
TQ
CC
>Mature Secondary Structure
MFVRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSDIVKGKPVIYEETCIGCGICV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCCHHH
KKCPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKI
HHCCHHHEEEECCCCHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCHHHHHHH
VAGELIPNFGDPNSKLGKDEVLKKFRGKEIYNYFKELYNNGLKIIHKIQYVEYASKFLKG
HHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TVNEILTKIDERGKKDEVKELLNMANLWNKDANVLSGGGLQRLLIAVSLLREADVYIFDE
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEEC
PSSYLDVRERMNMAKAIRELLKNKYVMVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSY
CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
AARVGINNFLKGYLPAENMKIRPDEIRFMLKEISDLDLSKDLKTKMKWTKIIKKLGDFQL
HHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE
VVNEGEAKEGEIIGILGPNGIGKTTFARILVGEISADEGSVTPEKQILSYKPQRILPNYD
EEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHCCCCCC
GTVQQYLENVSKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEA
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEHHHCCC
DLYVLDEPSSYLDVEERYIVAKAIKRVVRERKAVTFIIDHDLSIHDYIADRIIVFKGEPE
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCEEEEEECCCC
KAGFATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGEYYSMVLS
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE
TQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]