Definition Sulfolobus islandicus M.14.25 chromosome, complete genome.
Accession NC_012588
Length 2,608,832

Click here to switch to the map view.

The map label for this gene is 227828104

Identifier: 227828104

GI number: 227828104

Start: 1692954

End: 1693589

Strand: Direct

Name: 227828104

Synonym: M1425_1841

Alternate gene names: NA

Gene position: 1692954-1693589 (Clockwise)

Preceding gene: 227828103

Following gene: 227828105

Centisome position: 64.89

GC content: 37.74

Gene sequence:

>636_bases
GTGACTAATTTTAAGCTTAAGTATTGGGGTAATCAACAAGAGGATTATATTCTTCCTACTACATGGCTAGGGCGGGAATA
CTTAGTTTTAGGCAAATTACTTATTAAGTTAGCCCAATGGCGGGCTAAAGGGTTTATAGATTTTGACGTTTATTTAAGGG
TTAGCGGTGTTGGCACTCTTACTAATACTATTAATTATGAATACTACAAAGGGTTAGAAGACAAGTACGATTTGACTTTA
TACGTTAGGGCTAAGGATTCTTACTATCCTTTGGCATGGATTGATATAACTGGTTCAAGTTGGACTGAAGAGCAAAGCAA
AGAGCGTTACGGCGAAAGTATCTATGCTATTCTTAGTACTAAAGTGGAAGTAGCAAAGAAGTATGATGTGATGGGAAGGG
TTTGGTTTATTCATTATAACGATACTGAGGATAAGTTGAAGTGTATAAGTGCTTTGCAAATCTTAAACCTAGAAAAGCAA
GGGAAAATAAAGAAGGACAAATTTGAGAGAGACGCGGTTAGCTATTACTACCTAATTCCCGTTTCAATGTGGAAGAACCT
GACGGAATTAAGGGTTAGCCTTAAGGGTTTCTACCAGAGCTTTAAGGAGTATTTGGCTAGGGTGAGCGGGAAATGA

Upstream 100 bases:

>100_bases
TTGCTGAACATAAACCTAGTGAGTTTTACGACATTAAAGAATTAACACCAGACGAGATCAGTGAGTTATATGAAGAAGTG
AGGGATGAGGTGACCCGCCC

Downstream 100 bases:

>100_bases
GCAATAATCATTTTTATATGAAATTCACAGTAGGGTTAGTATTCGGGTTCATATTATTTTCATTTATATATAAAAATTCT
TCTACTCGGGAGTTCTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTNFKLKYWGNQQEDYILPTTWLGREYLVLGKLLIKLAQWRAKGFIDFDVYLRVSGVGTLTNTINYEYYKGLEDKYDLTL
YVRAKDSYYPLAWIDITGSSWTEEQSKERYGESIYAILSTKVEVAKKYDVMGRVWFIHYNDTEDKLKCISALQILNLEKQ
GKIKKDKFERDAVSYYYLIPVSMWKNLTELRVSLKGFYQSFKEYLARVSGK

Sequences:

>Translated_211_residues
MTNFKLKYWGNQQEDYILPTTWLGREYLVLGKLLIKLAQWRAKGFIDFDVYLRVSGVGTLTNTINYEYYKGLEDKYDLTL
YVRAKDSYYPLAWIDITGSSWTEEQSKERYGESIYAILSTKVEVAKKYDVMGRVWFIHYNDTEDKLKCISALQILNLEKQ
GKIKKDKFERDAVSYYYLIPVSMWKNLTELRVSLKGFYQSFKEYLARVSGK
>Mature_210_residues
TNFKLKYWGNQQEDYILPTTWLGREYLVLGKLLIKLAQWRAKGFIDFDVYLRVSGVGTLTNTINYEYYKGLEDKYDLTLY
VRAKDSYYPLAWIDITGSSWTEEQSKERYGESIYAILSTKVEVAKKYDVMGRVWFIHYNDTEDKLKCISALQILNLEKQG
KIKKDKFERDAVSYYYLIPVSMWKNLTELRVSLKGFYQSFKEYLARVSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24981; Mature: 24850

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFKLKYWGNQQEDYILPTTWLGREYLVLGKLLIKLAQWRAKGFIDFDVYLRVSGVGTL
CCCEEEEECCCCCCCEECCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEE
TNTINYEYYKGLEDKYDLTLYVRAKDSYYPLAWIDITGSSWTEEQSKERYGESIYAILST
HHHCCHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KVEVAKKYDVMGRVWFIHYNDTEDKLKCISALQILNLEKQGKIKKDKFERDAVSYYYLIP
HHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEE
VSMWKNLTELRVSLKGFYQSFKEYLARVSGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNFKLKYWGNQQEDYILPTTWLGREYLVLGKLLIKLAQWRAKGFIDFDVYLRVSGVGTL
CCEEEEECCCCCCCEECCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEE
TNTINYEYYKGLEDKYDLTLYVRAKDSYYPLAWIDITGSSWTEEQSKERYGESIYAILST
HHHCCHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
KVEVAKKYDVMGRVWFIHYNDTEDKLKCISALQILNLEKQGKIKKDKFERDAVSYYYLIP
HHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEE
VSMWKNLTELRVSLKGFYQSFKEYLARVSGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA