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The map label for this gene is 227828076

Identifier: 227828076

GI number: 227828076

Start: 1679215

End: 1679976

Strand: Direct

Name: 227828076

Synonym: M1425_1813

Alternate gene names: NA

Gene position: 1679215-1679976 (Clockwise)

Preceding gene: 227828075

Following gene: 227828088

Centisome position: 64.37

GC content: 42.13

Gene sequence:

>762_bases
TTGGTTGCCAATTTACGCCAATATGCGTCGGAAGGCAACATAAAGGCGTTTTACGATTGGTTACTAACAGAACGTAAAGT
AACAGAAAAGACGGCTAAAGAGTACGTTTCCGCTTTAGCGAAGCCGTTCCGCGAAACTAGGAATTCTCAGAAAGCGTATA
GACTATTTGCGAAATTCTTAGCGTTACGCGATATAATAAGTGACGATTTCGCCGAGAAGATACTAAAAGTCGTTAAAGTG
AAGAAGACTAACGCCGATATTTACATACCGACTTTAGAAGATGTAAAACGCACGCTTAAAATAGCAAAAGAATATAGCGA
AAACGTTTATCTTGTTTATCGTTTAGCGTTAGAGAGCGGTAGTAGACTGAGCGAAATACTCCGCATTTTGAAGGAACCTG
AACGTGATATATGCGACGGTTCGATATGCTATTATCCGCTATCATGGCAACGCGGATATAAAGGCGTTTTCTACGTATTC
CACTTAACGCCGTTACGCAAAGTTGACATAACGCAATGGGCGATAAGTGATTTTGAGCGACGAAATAAAGACGCTATCGC
GATAAAGTATATGAGGAAGTTCGTCGCGTCTAAGATGGCGGAACTAGGCGTACCTCTTGACGTCATAGACTTCATTCAAG
GACGTAAACCTACACGTGTGCTAACTCAACATTACGTATCGCTTTTCGGAATTGCGAAAGAACATTATCGTAAATACGCG
GAATGGTTAAGGAGTAACTGTGGGGGTGTCCCCCACGTTTGA

Upstream 100 bases:

>100_bases
CTGAACTCAAAAAATGTAGTATGCGGACCCGCCGGGATTTGAACCCGGGACCACCGGCTCCGGAGGCGGAAAAGAGAGAG
AAGAACGACGTAAAATAGCG

Downstream 100 bases:

>100_bases
AATCTCAACCCGTTCCGAGTACCTACCTTTCGTAGAATTGAAAGAAAAACAACTTTAGGTACTCGGTAGTTTTGAGGACT
TTTCACGCATTATAGCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: SSV1 Integrase Fragment Homolog; SSV1 Integrase-Like Protein; Integrase; Integrase Family Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVANLRQYASEGNIKAFYDWLLTERKVTEKTAKEYVSALAKPFRETRNSQKAYRLFAKFLALRDIISDDFAEKILKVVKV
KKTNADIYIPTLEDVKRTLKIAKEYSENVYLVYRLALESGSRLSEILRILKEPERDICDGSICYYPLSWQRGYKGVFYVF
HLTPLRKVDITQWAISDFERRNKDAIAIKYMRKFVASKMAELGVPLDVIDFIQGRKPTRVLTQHYVSLFGIAKEHYRKYA
EWLRSNCGGVPHV

Sequences:

>Translated_253_residues
MVANLRQYASEGNIKAFYDWLLTERKVTEKTAKEYVSALAKPFRETRNSQKAYRLFAKFLALRDIISDDFAEKILKVVKV
KKTNADIYIPTLEDVKRTLKIAKEYSENVYLVYRLALESGSRLSEILRILKEPERDICDGSICYYPLSWQRGYKGVFYVF
HLTPLRKVDITQWAISDFERRNKDAIAIKYMRKFVASKMAELGVPLDVIDFIQGRKPTRVLTQHYVSLFGIAKEHYRKYA
EWLRSNCGGVPHV
>Mature_253_residues
MVANLRQYASEGNIKAFYDWLLTERKVTEKTAKEYVSALAKPFRETRNSQKAYRLFAKFLALRDIISDDFAEKILKVVKV
KKTNADIYIPTLEDVKRTLKIAKEYSENVYLVYRLALESGSRLSEILRILKEPERDICDGSICYYPLSWQRGYKGVFYVF
HLTPLRKVDITQWAISDFERRNKDAIAIKYMRKFVASKMAELGVPLDVIDFIQGRKPTRVLTQHYVSLFGIAKEHYRKYA
EWLRSNCGGVPHV

Specific function: Unknown

COG id: COG4342

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29568; Mature: 29568

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANLRQYASEGNIKAFYDWLLTERKVTEKTAKEYVSALAKPFRETRNSQKAYRLFAKFL
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALRDIISDDFAEKILKVVKVKKTNADIYIPTLEDVKRTLKIAKEYSENVYLVYRLALESG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEEHHCC
SRLSEILRILKEPERDICDGSICYYPLSWQRGYKGVFYVFHLTPLRKVDITQWAISDFER
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
RNKDAIAIKYMRKFVASKMAELGVPLDVIDFIQGRKPTRVLTQHYVSLFGIAKEHYRKYA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EWLRSNCGGVPHV
HHHHHCCCCCCCC
>Mature Secondary Structure
MVANLRQYASEGNIKAFYDWLLTERKVTEKTAKEYVSALAKPFRETRNSQKAYRLFAKFL
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALRDIISDDFAEKILKVVKVKKTNADIYIPTLEDVKRTLKIAKEYSENVYLVYRLALESG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEEHHCC
SRLSEILRILKEPERDICDGSICYYPLSWQRGYKGVFYVFHLTPLRKVDITQWAISDFER
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
RNKDAIAIKYMRKFVASKMAELGVPLDVIDFIQGRKPTRVLTQHYVSLFGIAKEHYRKYA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EWLRSNCGGVPHV
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA