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The map label for this gene is pfdA [H]

Identifier: 227828021

GI number: 227828021

Start: 1627342

End: 1627785

Strand: Direct

Name: pfdA [H]

Synonym: M1425_1757

Alternate gene names: 227828021

Gene position: 1627342-1627785 (Clockwise)

Preceding gene: 227828020

Following gene: 227828022

Centisome position: 62.38

GC content: 33.56

Gene sequence:

>444_bases
ATGAGTCAAGGACAAGGAGGTATAACGTTAGACGATTTAATAGCGCAAGCAGATTACTTAAAAAGGTACATAGATTCATT
ACAGAGAACTCAATTAGAATTACTAGAGTCAATAAATTCAATAGATTCTGCAAAACAAGCCATAGAGACGATAAAGAGTG
GAAATAAAGAAATGTTAGTCTTCATAGATAGGAAAGGATATCTTTTAGCCAAAGTAGGGGGTATAGTAGGGGATAAGGTA
ACTGTCCATTTAGGTTTATCTTACTACGCGGAAGTAGATCTAGATTCAGCTATAAAAATTCTTGATAAAAGAAAAGATGA
GATAAGTAAAGCAGCACAAAATCTAAATAATGAACTTCAAAAAGCTGCTAGTACATACAATCAGATAGTTGACATACTAA
ATCAAATACAGCAAGCTGCAGCTAGGAGACAACAAGGTGAATAA

Upstream 100 bases:

>100_bases
CATAAAGATAGAGCAAATAAGTGAAATAAAAGAAGAAGAAATTCCAGATAGAAGGATAAGAGAATTAGCAAAGATTGATA
AAATTATAATGTGATGAGAC

Downstream 100 bases:

>100_bases
ATTGTTTTGATAAAATAAAGAAAGCTTTTTCTAATTTTGTAGATAAATTAAAGGGAGAGCAAGAAGAAACAGAAAAGATC
GAACAAAATATACCTACGCA

Product: prefoldin subunit alpha

Products: NA

Alternate protein names: GimC subunit alpha [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSQGQGGITLDDLIAQADYLKRYIDSLQRTQLELLESINSIDSAKQAIETIKSGNKEMLVFIDRKGYLLAKVGGIVGDKV
TVHLGLSYYAEVDLDSAIKILDKRKDEISKAAQNLNNELQKAASTYNQIVDILNQIQQAAARRQQGE

Sequences:

>Translated_147_residues
MSQGQGGITLDDLIAQADYLKRYIDSLQRTQLELLESINSIDSAKQAIETIKSGNKEMLVFIDRKGYLLAKVGGIVGDKV
TVHLGLSYYAEVDLDSAIKILDKRKDEISKAAQNLNNELQKAASTYNQIVDILNQIQQAAARRQQGE
>Mature_146_residues
SQGQGGITLDDLIAQADYLKRYIDSLQRTQLELLESINSIDSAKQAIETIKSGNKEMLVFIDRKGYLLAKVGGIVGDKVT
VHLGLSYYAEVDLDSAIKILDKRKDEISKAAQNLNNELQKAASTYNQIVDILNQIQQAAARRQQGE

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1730

COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin alpha subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011599
- InterPro:   IPR009053
- InterPro:   IPR004127 [H]

Pfam domain/function: PF02996 Prefoldin [H]

EC number: NA

Molecular weight: Translated: 16283; Mature: 16152

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGQGGITLDDLIAQADYLKRYIDSLQRTQLELLESINSIDSAKQAIETIKSGNKEMLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FIDRKGYLLAKVGGIVGDKVTVHLGLSYYAEVDLDSAIKILDKRKDEISKAAQNLNNELQ
EECCCCCHHHHHHCHHCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAASTYNQIVDILNQIQQAAARRQQGE
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQGQGGITLDDLIAQADYLKRYIDSLQRTQLELLESINSIDSAKQAIETIKSGNKEMLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FIDRKGYLLAKVGGIVGDKVTVHLGLSYYAEVDLDSAIKILDKRKDEISKAAQNLNNELQ
EECCCCCHHHHHHCHHCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAASTYNQIVDILNQIQQAAARRQQGE
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA