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The map label for this gene is rps19e [H]

Identifier: 227828015

GI number: 227828015

Start: 1625150

End: 1625614

Strand: Direct

Name: rps19e [H]

Synonym: M1425_1751

Alternate gene names: 227828015

Gene position: 1625150-1625614 (Clockwise)

Preceding gene: 227828013

Following gene: 227828016

Centisome position: 62.29

GC content: 35.48

Gene sequence:

>465_bases
ATGATAACAGCTGAAATGGTACCTCCGGACCTTTTGATAAAACGACTAGTGATATATCTTAAGGAGAATGTGAAGACTGT
GAACCCACCAGATTGGGCATTATTAGCTAAAACAGCTAGCTTTAAGGAAAGAGTCCCAGATAACTCAGAGGATTGGTGGT
ATATAAGAACTGCATCGTTATTGAGAAAACTTTACGTGAACTCGATTATTGGAATAGAAAAAACAAGAACAATCTACGGC
GGAAGCAAAAGAAGGGGGACTAGGCCAGAAAGATTCGTAAAAGCTCCTGGTCATGTAAATAGATTAATATTTCAACAATT
AGAAAAAGCAGGACTAGTTCAAAAAATAAAGAATAAGGGGAGAACTTTAAGTCCTAAGGGAAGGTCATTATTAGATAAAT
TAGCATTAGAAATCTTTAAAGAGCTGGCCGAGAATAATACTTCTTTGAAAGTATACTTAGAATAA

Upstream 100 bases:

>100_bases
CTGCTTAAAATCGGCTATATAAAATTCCATTCAAGATCATATGTTATTAAAAAGGATAAATTTTAAACCTTATATACTAC
GAATGTAATGGAGTCTTATA

Downstream 100 bases:

>100_bases
GGGGTGAAAAAGATGTCAGCTCCAAACTCATATGATGACGAAGAATTAGAAGAATTATTAAGAAGAAAAGCAGCACAAGA
GCAAAAAAGGCTAGAAGAAG

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MITAEMVPPDLLIKRLVIYLKENVKTVNPPDWALLAKTASFKERVPDNSEDWWYIRTASLLRKLYVNSIIGIEKTRTIYG
GSKRRGTRPERFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRTLSPKGRSLLDKLALEIFKELAENNTSLKVYLE

Sequences:

>Translated_154_residues
MITAEMVPPDLLIKRLVIYLKENVKTVNPPDWALLAKTASFKERVPDNSEDWWYIRTASLLRKLYVNSIIGIEKTRTIYG
GSKRRGTRPERFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRTLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
>Mature_154_residues
MITAEMVPPDLLIKRLVIYLKENVKTVNPPDWALLAKTASFKERVPDNSEDWWYIRTASLLRKLYVNSIIGIEKTRTIYG
GSKRRGTRPERFVKAPGHVNRLIFQQLEKAGLVQKIKNKGRTLSPKGRSLLDKLALEIFKELAENNTSLKVYLE

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=137, Percent_Identity=33.5766423357664, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17508697, Length=126, Percent_Identity=41.2698412698413, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6324451, Length=112, Percent_Identity=37.5, Blast_Score=91, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324027, Length=112, Percent_Identity=37.5, Blast_Score=91, Evalue=7e-20,
Organism=Drosophila melanogaster, GI17647891, Length=141, Percent_Identity=39.0070921985816, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24642576, Length=141, Percent_Identity=39.0070921985816, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24642574, Length=141, Percent_Identity=39.0070921985816, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24649452, Length=152, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 17706; Mature: 17706

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAEMVPPDLLIKRLVIYLKENVKTVNPPDWALLAKTASFKERVPDNSEDWWYIRTASL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
LRKLYVNSIIGIEKTRTIYGGSKRRGTRPERFVKAPGHVNRLIFQQLEKAGLVQKIKNKG
HHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RTLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MITAEMVPPDLLIKRLVIYLKENVKTVNPPDWALLAKTASFKERVPDNSEDWWYIRTASL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
LRKLYVNSIIGIEKTRTIYGGSKRRGTRPERFVKAPGHVNRLIFQQLEKAGLVQKIKNKG
HHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
RTLSPKGRSLLDKLALEIFKELAENNTSLKVYLE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]