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The map label for this gene is 227827983

Identifier: 227827983

GI number: 227827983

Start: 1595084

End: 1595809

Strand: Direct

Name: 227827983

Synonym: M1425_1718

Alternate gene names: NA

Gene position: 1595084-1595809 (Clockwise)

Preceding gene: 227827979

Following gene: 227827984

Centisome position: 61.14

GC content: 39.39

Gene sequence:

>726_bases
ATGGCAGTTGATGAACTATTTGACTCCTATGCAATAGAGACCATTGGAAAGAGAATATCTGGAGACATTGTTTGGAGTAA
GGATGTGTCGGGATCTTTAAGGAAATGGAGGGAGATGTTTAATGTTTCTCAAGGCGAATTGGCTAGGGAGATGGGGATTA
AGCAATCCGTTATTGCAGATTACGAGAGGGGGAGAAGGCAAGCTGGTAGTGAGTTCATTAAGCGGTATGTGCTAGCTTTG
ATTTCTATAGACGCCAGGAGGGGTTATAAGGTTATTAAAGAATTGGCTAAGATGTTTGGTATAAATTTTCCTTTTATTAT
TGATATGAGGGATTTCAATTCTCCTATTGGCATAGATAAGTTAATTAGGGCTGTTGACGGTGTTGTTGTAAACTCTTTTG
TTGCTGATAAGAAGATTTATGGTTATATTGTTACTGATAGTATTAGGGCTATTCTCAGCTTAAGCGGCCTGGAGTTTTAT
CAAGTTTTGAGCATGATGGTGAATAGGGTTGTGGTCTTCACGAGGGTAAGTAGCGGTAGGTCTCCAATGATAGCTCTTAA
GGTTGCCCCAATAAGGCCTCAAATAGTTGTTTTCCACAGACCAATTAAGCTAGATCCTTTAGCATTAATGCTAAGCGAGG
TTGAAGGAATAAATATTATAGTCTCTACGAAGCCAACTGAGGAGGATTTAATTAAGGGTTTGACGTCTCTCCTTGCAGAA
TCATAA

Upstream 100 bases:

>100_bases
GATTTGAACCCGGGACCACGACGACCCGAACGTCGCATCCTAGTCCAGGCTAGACCACGGACCCCTATTATTTAAATTAT
AACGCGTGTTTATAACACTA

Downstream 100 bases:

>100_bases
TTGCCTTTGCTATATCACCATTTGCCTTAATTAAGGCCTCTCTCGCTTCCTTTTCGCTTTTACCAGTTTGCTCGGCGACG
AATTTGACATCTTCTTCTTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAVDELFDSYAIETIGKRISGDIVWSKDVSGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKRYVLAL
ISIDARRGYKVIKELAKMFGINFPFIIDMRDFNSPIGIDKLIRAVDGVVVNSFVADKKIYGYIVTDSIRAILSLSGLEFY
QVLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQIVVFHRPIKLDPLALMLSEVEGINIIVSTKPTEEDLIKGLTSLLAE
S

Sequences:

>Translated_241_residues
MAVDELFDSYAIETIGKRISGDIVWSKDVSGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKRYVLAL
ISIDARRGYKVIKELAKMFGINFPFIIDMRDFNSPIGIDKLIRAVDGVVVNSFVADKKIYGYIVTDSIRAILSLSGLEFY
QVLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQIVVFHRPIKLDPLALMLSEVEGINIIVSTKPTEEDLIKGLTSLLAE
S
>Mature_240_residues
AVDELFDSYAIETIGKRISGDIVWSKDVSGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKRYVLALI
SIDARRGYKVIKELAKMFGINFPFIIDMRDFNSPIGIDKLIRAVDGVVVNSFVADKKIYGYIVTDSIRAILSLSGLEFYQ
VLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQIVVFHRPIKLDPLALMLSEVEGINIIVSTKPTEEDLIKGLTSLLAES

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 27037; Mature: 26906

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDELFDSYAIETIGKRISGDIVWSKDVSGSLRKWREMFNVSQGELAREMGIKQSVIAD
CCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
YERGRRQAGSEFIKRYVLALISIDARRGYKVIKELAKMFGINFPFIIDMRDFNSPIGIDK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
LIRAVDGVVVNSFVADKKIYGYIVTDSIRAILSLSGLEFYQVLSMMVNRVVVFTRVSSGR
HHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCC
SPMIALKVAPIRPQIVVFHRPIKLDPLALMLSEVEGINIIVSTKPTEEDLIKGLTSLLAE
CCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure 
AVDELFDSYAIETIGKRISGDIVWSKDVSGSLRKWREMFNVSQGELAREMGIKQSVIAD
CHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
YERGRRQAGSEFIKRYVLALISIDARRGYKVIKELAKMFGINFPFIIDMRDFNSPIGIDK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
LIRAVDGVVVNSFVADKKIYGYIVTDSIRAILSLSGLEFYQVLSMMVNRVVVFTRVSSGR
HHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCC
SPMIALKVAPIRPQIVVFHRPIKLDPLALMLSEVEGINIIVSTKPTEEDLIKGLTSLLAE
CCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]