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The map label for this gene is ribB [H]

Identifier: 227827968

GI number: 227827968

Start: 1574810

End: 1575469

Strand: Direct

Name: ribB [H]

Synonym: M1425_1701

Alternate gene names: 227827968

Gene position: 1574810-1575469 (Clockwise)

Preceding gene: 227827966

Following gene: 227827969

Centisome position: 60.36

GC content: 33.94

Gene sequence:

>660_bases
ATGGATTTTCTTAGTTTACGTAAAGATTTGGAGTCTGGAATACCGCTATTAATATACGACTTTGACGGAAGAGAGGAAGA
AACAGACATGATATTTTACGCAGGAGCAATAAGCTGGAAAAGTATATATACTCTGAGAAAAGAAGCAGGAGGATTGATAT
GTTACGCAACGTCAAATAGTGAAGCTAAAACATTGGGTTTGAATTTTATGGCAGAAGAGTTAAAACGACACGAATTATAC
AAAAAATTAGTAAAGAAGCCTTCTTATGGAGATTATCCAGCGTTTTCCCTATGGGTTAACCATGTCAATACAAAAACTGG
AATCTCTGACTATGATAGATATATTACAATAAGTGAATTACATAAAATAATAGCTAAAACTAAAACAAATCCAGAAGATG
CGAGAAGGGAATTTTACGAGAATTTCATGACACCGGGCCATGTGCCAATACTAATTGCAAGAGATATAAGGGAGAGAAGA
GGCCATACTGAATTATCAATCGCGCTGTTACAAAAGTTAGGGTTAGAAAGTAGTGCGGTAATAGCAGAGATGCTAGATGA
GAAATTAAGCATGAATAAAGAAAAAGTAAAAAAGATTGCAAAAAATCTAGGATTTCACTTTATAGAGGGAAAAGATATTT
TTAAAGAGGTGGTTATATGA

Upstream 100 bases:

>100_bases
TATATTTCTGTTGGATCAATAATTTAAACTCTCAAATAAATATTGTACTTAGATATGAGTAAATACTTTTTTATACTATT
GCAGTTCTGATATTCTTGGG

Downstream 100 bases:

>100_bases
CGAGAAAATACGGAATAGCCGATACAACATTTTCCAGGGTTGATATGGGAAGCATAGCGTATAAGGTAATAAGAAGTGAA
GACGATGAAGCGGAGATCAT

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDFLSLRKDLESGIPLLIYDFDGREEETDMIFYAGAISWKSIYTLRKEAGGLICYATSNSEAKTLGLNFMAEELKRHELY
KKLVKKPSYGDYPAFSLWVNHVNTKTGISDYDRYITISELHKIIAKTKTNPEDARREFYENFMTPGHVPILIARDIRERR
GHTELSIALLQKLGLESSAVIAEMLDEKLSMNKEKVKKIAKNLGFHFIEGKDIFKEVVI

Sequences:

>Translated_219_residues
MDFLSLRKDLESGIPLLIYDFDGREEETDMIFYAGAISWKSIYTLRKEAGGLICYATSNSEAKTLGLNFMAEELKRHELY
KKLVKKPSYGDYPAFSLWVNHVNTKTGISDYDRYITISELHKIIAKTKTNPEDARREFYENFMTPGHVPILIARDIRERR
GHTELSIALLQKLGLESSAVIAEMLDEKLSMNKEKVKKIAKNLGFHFIEGKDIFKEVVI
>Mature_219_residues
MDFLSLRKDLESGIPLLIYDFDGREEETDMIFYAGAISWKSIYTLRKEAGGLICYATSNSEAKTLGLNFMAEELKRHELY
KKLVKKPSYGDYPAFSLWVNHVNTKTGISDYDRYITISELHKIIAKTKTNPEDARREFYENFMTPGHVPILIARDIRERR
GHTELSIALLQKLGLESSAVIAEMLDEKLSMNKEKVKKIAKNLGFHFIEGKDIFKEVVI

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320695, Length=188, Percent_Identity=28.7234042553192, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 25188; Mature: 25188

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLSLRKDLESGIPLLIYDFDGREEETDMIFYAGAISWKSIYTLRKEAGGLICYATSNS
CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
EAKTLGLNFMAEELKRHELYKKLVKKPSYGDYPAFSLWVNHVNTKTGISDYDRYITISEL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHH
HKIIAKTKTNPEDARREFYENFMTPGHVPILIARDIRERRGHTELSIALLQKLGLESSAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCHHHH
IAEMLDEKLSMNKEKVKKIAKNLGFHFIEGKDIFKEVVI
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHCC
>Mature Secondary Structure
MDFLSLRKDLESGIPLLIYDFDGREEETDMIFYAGAISWKSIYTLRKEAGGLICYATSNS
CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCC
EAKTLGLNFMAEELKRHELYKKLVKKPSYGDYPAFSLWVNHVNTKTGISDYDRYITISEL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEHHHH
HKIIAKTKTNPEDARREFYENFMTPGHVPILIARDIRERRGHTELSIALLQKLGLESSAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCHHHH
IAEMLDEKLSMNKEKVKKIAKNLGFHFIEGKDIFKEVVI
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]