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The map label for this gene is rps25e [H]

Identifier: 227827950

GI number: 227827950

Start: 1556745

End: 1557077

Strand: Direct

Name: rps25e [H]

Synonym: M1425_1683

Alternate gene names: 227827950

Gene position: 1556745-1557077 (Clockwise)

Preceding gene: 227827944

Following gene: 227827953

Centisome position: 59.67

GC content: 33.93

Gene sequence:

>333_bases
ATGGGTGGAGCTTCAAAGAAGCCTATTTCAACAATGGAAAAGAGATTAAAGAAGGAGGCTGAAAAGCAACAAAAGGCGGA
GGAGAAGAAGAAAGGTCCATCAAAAACTGGAAAAGAGATAATTAGTAGGGCAGTAACTATAGATGAAGAAACTAAGAAGA
GAGTTCTAGATGAAATAAAGAAAGAGAGTATTATAACCCCGTATGCCTTAGCTACAAAATCGGGAATAAGCATAAGTGTA
GCTAGAAAAATACTAAAGGAATTAGAAAATCAGAATGTAGTTAAGTTATATTCTAAGAATAGAAGATTGGAAATATATAT
TGCTGCGTCTTAA

Upstream 100 bases:

>100_bases
AAGCAAACTTCGATACTCTGCTAATGGTCTCTTCTAATAATTCAGATGACATCTATAATTTATTAGGCAGAATTGGAATT
TAAAACATAGTGAGTAAGAG

Downstream 100 bases:

>100_bases
AATCTATTCCTCTTCTACTGTAGAAGCAGATCTCTTCTTCACCTCACCCTTAATCTTTTTTACACCTTTACAAAGACCAT
TTATAATTGGTTCTAAATAA

Product: 30S ribosomal protein S25e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKRVLDEIKKESIITPYALATKSGISISV
ARKILKELENQNVVKLYSKNRRLEIYIAAS

Sequences:

>Translated_110_residues
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKRVLDEIKKESIITPYALATKSGISISV
ARKILKELENQNVVKLYSKNRRLEIYIAAS
>Mature_109_residues
GGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKRVLDEIKKESIITPYALATKSGISISVA
RKILKELENQNVVKLYSKNRRLEIYIAAS

Specific function: Unknown

COG id: COG4901

COG function: function code J; Ribosomal protein S25

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S25e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004977
- InterPro:   IPR011991
- ProDom:   PD012268 [H]

Pfam domain/function: PF03297 Ribosomal_S25 [H]

EC number: NA

Molecular weight: Translated: 12374; Mature: 12242

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKRVLDEIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KESIITPYALATKSGISISVARKILKELENQNVVKLYSKNRRLEIYIAAS
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEHCCCCCEEEEEEECC
>Mature Secondary Structure 
GGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKRVLDEIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KESIITPYALATKSGISISVARKILKELENQNVVKLYSKNRRLEIYIAAS
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]