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The map label for this gene is ychE [C]

Identifier: 227827792

GI number: 227827792

Start: 1421961

End: 1422569

Strand: Direct

Name: ychE [C]

Synonym: M1425_1525

Alternate gene names: 227827792

Gene position: 1421961-1422569 (Clockwise)

Preceding gene: 227827791

Following gene: 227827793

Centisome position: 54.51

GC content: 35.63

Gene sequence:

>609_bases
ATGAGCGAATTAGTTTCAATCCCAGAAATAGCCTTTAAACTATATGCAATTATGGATCCCCTATCAATACTTCCTTATCT
CATTGCGTTGTATGAAGAATTCAATCGCAATTCTCAAAATAAGATAAGTTGGGGATTTTTGGTAAACAAATTATCCATAG
CAGTTGCTGTATTGCTTTTATTTTTCTCCATACTTGGTGGACCACTTTTAGCTTTTTTAGGCATAAGTGTTTCTGCTTTA
GAGATAGGTGGAGGTATAATACTAGTTTACTTAGGTGTGGATACTCTTGGAGGATTCCAGCAGTTGAAGTTCTTATCAAG
CAAGATAGAGGAAGCCATAATCACGCCTATTGCTACGCCTCTTATCGTAGGTCCAGGTACAATGACTGGATTAATCACCT
TATCGGTCAGTAATAATTTAATAATTTTAATTCTCGGTAGTTTACTGGCTGCACTACTGGTTTATCTGTCTTTACTATTA
GGTCCTATCATAATTAGAGTACTAGGTAATACAGGCACAGTAGCAGTAGGTAGATTTATGGCAATCATAATAGCAGCATT
TGGCGTTCAGCTTATAATAGATGGTATATCACAAATAAAGTTGATATGA

Upstream 100 bases:

>100_bases
CTAAAATATATCTTGTTCTCGGTAAGCTACTAATAGTATTAACTACGAACGATAATGATGAGAAGATTAAAAATCTTAAA
GAAGTTCTTAATTTGCTAGA

Downstream 100 bases:

>100_bases
AGAATTCTGTTTAAGATGAAAATTTTTTAACACGATCTCTATATGTTTATTAGCATGTCAGATAGTAAAAAACGTACGGT
AGATTTGGATGCAATAGATA

Product: multiple antibiotic resistance (MarC)-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSELVSIPEIAFKLYAIMDPLSILPYLIALYEEFNRNSQNKISWGFLVNKLSIAVAVLLLFFSILGGPLLAFLGISVSAL
EIGGGIILVYLGVDTLGGFQQLKFLSSKIEEAIITPIATPLIVGPGTMTGLITLSVSNNLIILILGSLLAALLVYLSLLL
GPIIIRVLGNTGTVAVGRFMAIIIAAFGVQLIIDGISQIKLI

Sequences:

>Translated_202_residues
MSELVSIPEIAFKLYAIMDPLSILPYLIALYEEFNRNSQNKISWGFLVNKLSIAVAVLLLFFSILGGPLLAFLGISVSAL
EIGGGIILVYLGVDTLGGFQQLKFLSSKIEEAIITPIATPLIVGPGTMTGLITLSVSNNLIILILGSLLAALLVYLSLLL
GPIIIRVLGNTGTVAVGRFMAIIIAAFGVQLIIDGISQIKLI
>Mature_201_residues
SELVSIPEIAFKLYAIMDPLSILPYLIALYEEFNRNSQNKISWGFLVNKLSIAVAVLLLFFSILGGPLLAFLGISVSALE
IGGGIILVYLGVDTLGGFQQLKFLSSKIEEAIITPIATPLIVGPGTMTGLITLSVSNNLIILILGSLLAALLVYLSLLLG
PIIIRVLGNTGTVAVGRFMAIIIAAFGVQLIIDGISQIKLI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=197, Percent_Identity=29.4416243654822, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789842, Length=202, Percent_Identity=32.1782178217822, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21438; Mature: 21307

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELVSIPEIAFKLYAIMDPLSILPYLIALYEEFNRNSQNKISWGFLVNKLSIAVAVLLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
FFSILGGPLLAFLGISVSALEIGGGIILVYLGVDTLGGFQQLKFLSSKIEEAIITPIATP
HHHHHHHHHHHHHCCCHHEEECCCCEEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHCCC
LIVGPGTMTGLITLSVSNNLIILILGSLLAALLVYLSLLLGPIIIRVLGNTGTVAVGRFM
EEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AIIIAAFGVQLIIDGISQIKLI
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SELVSIPEIAFKLYAIMDPLSILPYLIALYEEFNRNSQNKISWGFLVNKLSIAVAVLLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
FFSILGGPLLAFLGISVSALEIGGGIILVYLGVDTLGGFQQLKFLSSKIEEAIITPIATP
HHHHHHHHHHHHHCCCHHEEECCCCEEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHCCC
LIVGPGTMTGLITLSVSNNLIILILGSLLAALLVYLSLLLGPIIIRVLGNTGTVAVGRFM
EEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AIIIAAFGVQLIIDGISQIKLI
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]