| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827733
Identifier: 227827733
GI number: 227827733
Start: 1373138
End: 1373860
Strand: Direct
Name: 227827733
Synonym: M1425_1464
Alternate gene names: NA
Gene position: 1373138-1373860 (Clockwise)
Preceding gene: 227827732
Following gene: 227827734
Centisome position: 52.63
GC content: 30.57
Gene sequence:
>723_bases ATGTCAGTTCAGATTAGTGGATCAGAGATTATATCGCTAGATCCTAATGCGTATGTAACAGACGCTTTATACTTCATGAG AAGAAATAATGTGAGAAGATTAGTAGTAAGTAATTCCAACAATATAATAGGTATTTTTACGATTGAGAATGGAATTAGAC AAATTTTAGAAAACAGATTAGAAGTTAGACTAAATGAATTAAAGTTAAAAAGACCGATATTTATCGAGAATAATGATGTT AAAAGTATAGTGAGAACAATGATTAACGAGAACTCGGATTTTGTAATATATGGGGGGAAATATATTATAACCGAGAAGGA TGTTGTAAGGTCTTTCAACTGGAGTTCGGTAAAGGAAAATATAGAAAGTATTAGTAAAGACGCAATTGTAGTTCAACCCT TCACGAAGATCTCGACCTGTATAGAAATTATGCTTAAAAACAATATTAGGCACTTGCCAGTAGTTAATGGGATTGCACTA GGCATAGTTAGCGCGAGGGATATAGCCTATTCTTATGACTCAATAACTGGAAATACGATAGTTGAAAAAATTATGAATGT AAATCTAGTTACTGCAGATGATAATAATGAGATAAATGAAGCAGTTAATTTAATGATGGAGAGAAATGTTGGCAGTCTAA TAATTAAAACTAGTGTTAAGAACAAGGTTAAAATTCTTACTAACAGAGATTTAATAAAGTTGATATTTAGTTATATATTG TGA
Upstream 100 bases:
>100_bases ATTAGAGCTTTAAGATTAGATGGCGTGAAAGTAGAAGTGACATCAGATAACGCTTTATTGCTAACTCTTTATAATTTGAT GAAAGTACTAGGAGTTAAAA
Downstream 100 bases:
>100_bases TATTCTCTTGTCCTATTGATGGAAGTGATGTAAACGAGAAGTTAGAGTGCGAAAAGGGTCATAGATTTAATGTAATCGAA GATCAGATTTACGATTTCTT
Product: signal transduction protein with CBS domains
Products: NA
Alternate protein names: Signal-Transduction Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSVQISGSEIISLDPNAYVTDALYFMRRNNVRRLVVSNSNNIIGIFTIENGIRQILENRLEVRLNELKLKRPIFIENNDV KSIVRTMINENSDFVIYGGKYIITEKDVVRSFNWSSVKENIESISKDAIVVQPFTKISTCIEIMLKNNIRHLPVVNGIAL GIVSARDIAYSYDSITGNTIVEKIMNVNLVTADDNNEINEAVNLMMERNVGSLIIKTSVKNKVKILTNRDLIKLIFSYIL
Sequences:
>Translated_240_residues MSVQISGSEIISLDPNAYVTDALYFMRRNNVRRLVVSNSNNIIGIFTIENGIRQILENRLEVRLNELKLKRPIFIENNDV KSIVRTMINENSDFVIYGGKYIITEKDVVRSFNWSSVKENIESISKDAIVVQPFTKISTCIEIMLKNNIRHLPVVNGIAL GIVSARDIAYSYDSITGNTIVEKIMNVNLVTADDNNEINEAVNLMMERNVGSLIIKTSVKNKVKILTNRDLIKLIFSYIL >Mature_239_residues SVQISGSEIISLDPNAYVTDALYFMRRNNVRRLVVSNSNNIIGIFTIENGIRQILENRLEVRLNELKLKRPIFIENNDVK SIVRTMINENSDFVIYGGKYIITEKDVVRSFNWSSVKENIESISKDAIVVQPFTKISTCIEIMLKNNIRHLPVVNGIALG IVSARDIAYSYDSITGNTIVEKIMNVNLVTADDNNEINEAVNLMMERNVGSLIIKTSVKNKVKILTNRDLIKLIFSYIL
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27241; Mature: 27110
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQISGSEIISLDPNAYVTDALYFMRRNNVRRLVVSNSNNIIGIFTIENGIRQILENRL CEEEECCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHHHHHHHHHH EVRLNELKLKRPIFIENNDVKSIVRTMINENSDFVIYGGKYIITEKDVVRSFNWSSVKEN HEEHHHHCCCCCEEEECCCHHHHHHHHHCCCCCEEEECCEEEEECHHHHHCCCHHHHHHH IESISKDAIVVQPFTKISTCIEIMLKNNIRHLPVVNGIALGIVSARDIAYSYDSITGNTI HHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEHHHHEEECCCCCHHHH VEKIMNVNLVTADDNNEINEAVNLMMERNVGSLIIKTSVKNKVKILTNRDLIKLIFSYIL HHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHC >Mature Secondary Structure SVQISGSEIISLDPNAYVTDALYFMRRNNVRRLVVSNSNNIIGIFTIENGIRQILENRL EEEECCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHHHHHHHHHHH EVRLNELKLKRPIFIENNDVKSIVRTMINENSDFVIYGGKYIITEKDVVRSFNWSSVKEN HEEHHHHCCCCCEEEECCCHHHHHHHHHCCCCCEEEECCEEEEECHHHHHCCCHHHHHHH IESISKDAIVVQPFTKISTCIEIMLKNNIRHLPVVNGIALGIVSARDIAYSYDSITGNTI HHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEHHHHEEECCCCCHHHH VEKIMNVNLVTADDNNEINEAVNLMMERNVGSLIIKTSVKNKVKILTNRDLIKLIFSYIL HHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA