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The map label for this gene is rpl24p [H]

Identifier: 227827702

GI number: 227827702

Start: 1345712

End: 1346071

Strand: Direct

Name: rpl24p [H]

Synonym: M1425_1431

Alternate gene names: 227827702

Gene position: 1345712-1346071 (Clockwise)

Preceding gene: 227827701

Following gene: 227827703

Centisome position: 51.58

GC content: 36.39

Gene sequence:

>360_bases
ATGGTATCTCTTAAACCTTCTAAACAGAGGAGATTATTACACACTTTACCATTACATCAAAGGAAGAAGTTGTTGATTGC
TAAAGTCTCTGATGAGATTGCCTCTCAATATGGTATAAAACGTATTAGAGTGAGAAAAGGTGATACTGTTAGGGTAATGC
GGGGAAGTCATAATGGAAAGGAAGGGAAGGTAACTGAAATTAATACTAGGACTGGAAGATTAGCAATAGAAGGGATAACG
AGAAAAAAAGCTGATGGAACACCAGTATATGTGTGGATTCACGCATCCAAAGTAATGATAACTAAGCTAGATCTGAGTGA
TCCAAGAAGGAGAGAAAAGTTAGAAAAATCTAAGAAGTGA

Upstream 100 bases:

>100_bases
GAACACCAAAAGGTACTGAAGTTAGGGGTCCAATAGCAAGAGAAGCAGCTGAAAGATGGCCAAAAATAGCAAGTCTTGCT
ACATTGGTGGTGTAGGAAAT

Downstream 100 bases:

>100_bases
TGAAAAATGGCTCACATAACAAGATTTGAAACACCTTGGTTTTTAGTAATAAGCAAAAAACAATATAAGTGGACGGTTAG
ACCTAATGCTGGACCTCACC

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVSLKPSKQRRLLHTLPLHQRKKLLIAKVSDEIASQYGIKRIRVRKGDTVRVMRGSHNGKEGKVTEINTRTGRLAIEGIT
RKKADGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK

Sequences:

>Translated_119_residues
MVSLKPSKQRRLLHTLPLHQRKKLLIAKVSDEIASQYGIKRIRVRKGDTVRVMRGSHNGKEGKVTEINTRTGRLAIEGIT
RKKADGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
>Mature_119_residues
MVSLKPSKQRRLLHTLPLHQRKKLLIAKVSDEIASQYGIKRIRVRKGDTVRVMRGSHNGKEGKVTEINTRTGRLAIEGIT
RKKADGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit [H]

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family [H]

Homologues:

Organism=Homo sapiens, GI7705813, Length=112, Percent_Identity=36.6071428571429, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI4506621, Length=112, Percent_Identity=36.6071428571429, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17535693, Length=110, Percent_Identity=39.0909090909091, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI32564329, Length=98, Percent_Identity=36.734693877551, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17535691, Length=98, Percent_Identity=36.734693877551, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6323376, Length=103, Percent_Identity=38.8349514563107, Blast_Score=77, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6321471, Length=103, Percent_Identity=37.8640776699029, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357853, Length=111, Percent_Identity=36.9369369369369, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW [H]

EC number: NA

Molecular weight: Translated: 13662; Mature: 13662

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLKPSKQRRLLHTLPLHQRKKLLIAKVSDEIASQYGIKRIRVRKGDTVRVMRGSHNGK
CCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCEEEEEECCCEEEEEECCCCCC
EGKVTEINTRTGRLAIEGITRKKADGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
CCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVSLKPSKQRRLLHTLPLHQRKKLLIAKVSDEIASQYGIKRIRVRKGDTVRVMRGSHNGK
CCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCEEEEEECCCEEEEEECCCCCC
EGKVTEINTRTGRLAIEGITRKKADGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
CCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]