| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827620
Identifier: 227827620
GI number: 227827620
Start: 1280245
End: 1280985
Strand: Direct
Name: 227827620
Synonym: M1425_1348
Alternate gene names: NA
Gene position: 1280245-1280985 (Clockwise)
Preceding gene: 227827619
Following gene: 227827621
Centisome position: 49.07
GC content: 34.28
Gene sequence:
>741_bases ATGAGTGAGGACTATCAAAGTGATGATATAGAGGCTATAGCGCAGCAGATAAGCGAGGAGGAGAAAACAGGTAAGGAGTC GCCTAGATCCAAATTGGTTGAGGCAATACTACTCCTCCTCTACGCTAGACCATTAAGAACAGCTGAAATTGCGACTAATT TAGGTTACGAAACTAAATACATAAGTAGTTATCTCAGTTATTGGAAGAAGAAAGGTTTAGTTTATCAAGAAGGAGGAAGA TGGCACTTAAGTAGGAGAGGAGAAAACATAGCTAGAGATATTATTGAATCACAAAACAATTCTAAATTCAAAGAGTACTT ATTACTTGCTAAGCAAGTACTAGAGGGTGAAAAAGTTTACCAAACAAAAAACAACAAAGTTGAGAAAAGAGATGACAAAA AAGCACAAGAAGTTTTGTGGTTTATTGAGGGAAAAACCAGTAATGAAAACAAAAAACAACAAAAGGCTAATCCAACGGAT TGTATAAAGGAGATTTTGGATAAACTTGATGATGATGAAAAAGAAATACTAAGTTATTTATTAAACAAGTATAAGGAGTG GGGGACAACTTACATCTACCTTGACCAACTTCAAGAAGAAATGAAAGCTGATACTAGTTGGTTATTTAGAGTACTCAAGA ACTTACAAATTAAAAGGCTCCTTTACGTATATCAAGATCCTAAAATGGGAGTCAGAATAGGCCTTTCAAAAAATCTAAAA GACAAACTCTCTTCTTGTTAA
Upstream 100 bases:
>100_bases TAAAACTTGCCAATGAGTAGTACTGAAATGAAAAATTAACTGAATAATCCCAGTCGGGATTTTAGCTTGTATTTTAAGTT ATAATGCCTAATATAATAAG
Downstream 100 bases:
>100_bases CTTTCCCTTCTCCTTTTGGCATTATAATTACTACTACTATATGTAGATTAAATTATAAGTACATTGAAAGAATGATCAAG ATTATACAAACCATTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSEDYQSDDIEAIAQQISEEEKTGKESPRSKLVEAILLLLYARPLRTAEIATNLGYETKYISSYLSYWKKKGLVYQEGGR WHLSRRGENIARDIIESQNNSKFKEYLLLAKQVLEGEKVYQTKNNKVEKRDDKKAQEVLWFIEGKTSNENKKQQKANPTD CIKEILDKLDDDEKEILSYLLNKYKEWGTTYIYLDQLQEEMKADTSWLFRVLKNLQIKRLLYVYQDPKMGVRIGLSKNLK DKLSSC
Sequences:
>Translated_246_residues MSEDYQSDDIEAIAQQISEEEKTGKESPRSKLVEAILLLLYARPLRTAEIATNLGYETKYISSYLSYWKKKGLVYQEGGR WHLSRRGENIARDIIESQNNSKFKEYLLLAKQVLEGEKVYQTKNNKVEKRDDKKAQEVLWFIEGKTSNENKKQQKANPTD CIKEILDKLDDDEKEILSYLLNKYKEWGTTYIYLDQLQEEMKADTSWLFRVLKNLQIKRLLYVYQDPKMGVRIGLSKNLK DKLSSC >Mature_245_residues SEDYQSDDIEAIAQQISEEEKTGKESPRSKLVEAILLLLYARPLRTAEIATNLGYETKYISSYLSYWKKKGLVYQEGGRW HLSRRGENIARDIIESQNNSKFKEYLLLAKQVLEGEKVYQTKNNKVEKRDDKKAQEVLWFIEGKTSNENKKQQKANPTDC IKEILDKLDDDEKEILSYLLNKYKEWGTTYIYLDQLQEEMKADTSWLFRVLKNLQIKRLLYVYQDPKMGVRIGLSKNLKD KLSSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28899; Mature: 28768
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDYQSDDIEAIAQQISEEEKTGKESPRSKLVEAILLLLYARPLRTAEIATNLGYETKY CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH ISSYLSYWKKKGLVYQEGGRWHLSRRGENIARDIIESQNNSKFKEYLLLAKQVLEGEKVY HHHHHHHHHHCCCEEECCCEEEHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH QTKNNKVEKRDDKKAQEVLWFIEGKTSNENKKQQKANPTDCIKEILDKLDDDEKEILSYL HCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LNKYKEWGTTYIYLDQLQEEMKADTSWLFRVLKNLQIKRLLYVYQDPKMGVRIGLSKNLK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHH DKLSSC HHHCCC >Mature Secondary Structure SEDYQSDDIEAIAQQISEEEKTGKESPRSKLVEAILLLLYARPLRTAEIATNLGYETKY CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH ISSYLSYWKKKGLVYQEGGRWHLSRRGENIARDIIESQNNSKFKEYLLLAKQVLEGEKVY HHHHHHHHHHCCCEEECCCEEEHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHH QTKNNKVEKRDDKKAQEVLWFIEGKTSNENKKQQKANPTDCIKEILDKLDDDEKEILSYL HCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LNKYKEWGTTYIYLDQLQEEMKADTSWLFRVLKNLQIKRLLYVYQDPKMGVRIGLSKNLK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHH DKLSSC HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA