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The map label for this gene is yhbO [C]

Identifier: 227827432

GI number: 227827432

Start: 1090096

End: 1090617

Strand: Direct

Name: yhbO [C]

Synonym: M1425_1151

Alternate gene names: 227827432

Gene position: 1090096-1090617 (Clockwise)

Preceding gene: 227827431

Following gene: 227827436

Centisome position: 41.78

GC content: 40.04

Gene sequence:

>522_bases
ATGGACTCGAAAAAGGTCTTATTCATAGTTGGAGAAGAGTTTGAGGATATTGAGCTATTATATCCCTACTACAGGGTAAT
TGAAGAAGGTTTTAGACCTGTAATAGCGTGGAAAGAGGCTAATGCCAGAGTTACAGGGAAGCACGGATATACTGTAATTT
CTGACATCGCGTTCAAGGATGTTAGGCCAGAGGATTACGTAGCACTGGTCATACCAGGAGGTAGAGGACCAGAACATATA
AGGATCCTAGAGGAAGTTAAAAATCTTACTAGAAAATTCTTTGAGTTGAAAAAGCCAGTTGCGGCAATATGTCACGGTCC
TCAAATCTTAATTTCAGCTAATCTTGTTAAAGGAAGAAGACTAACGTCAGTCACGTCAATAAAAGATGATGTAATAGCTG
CAGGTGGAATCTACATTGATAACGATGTGGTAGTAGATGAAAATCTGATATCCTCTAGAGTCCCTAGTGATCTACCAGCC
TTTGCGTCTACGTTAGTCAAGGCGCTAAAGAGCCTAAAATAA

Upstream 100 bases:

>100_bases
GAGAGAAATAATTGTCTCATTTAAAAAGAAACTTTATATTTTTTAGTTAAATCGTCTATATATAGAAAAACTTTTTAGCT
GTGAACAAGGTATCTAAGTT

Downstream 100 bases:

>100_bases
ATTATTATTGACCTTTTTTCTCCTCTTCATTGAATAGTTCATTTATCTTTTTATTATATTTTTCAAGGATTTCTGAAATC
TCCTTCTGGGCCTCCTCATA

Product: intracellular protease PfpI family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDSKKVLFIVGEEFEDIELLYPYYRVIEEGFRPVIAWKEANARVTGKHGYTVISDIAFKDVRPEDYVALVIPGGRGPEHI
RILEEVKNLTRKFFELKKPVAAICHGPQILISANLVKGRRLTSVTSIKDDVIAAGGIYIDNDVVVDENLISSRVPSDLPA
FASTLVKALKSLK

Sequences:

>Translated_173_residues
MDSKKVLFIVGEEFEDIELLYPYYRVIEEGFRPVIAWKEANARVTGKHGYTVISDIAFKDVRPEDYVALVIPGGRGPEHI
RILEEVKNLTRKFFELKKPVAAICHGPQILISANLVKGRRLTSVTSIKDDVIAAGGIYIDNDVVVDENLISSRVPSDLPA
FASTLVKALKSLK
>Mature_173_residues
MDSKKVLFIVGEEFEDIELLYPYYRVIEEGFRPVIAWKEANARVTGKHGYTVISDIAFKDVRPEDYVALVIPGGRGPEHI
RILEEVKNLTRKFFELKKPVAAICHGPQILISANLVKGRRLTSVTSIKDDVIAAGGIYIDNDVVVDENLISSRVPSDLPA
FASTLVKALKSLK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=169, Percent_Identity=40.2366863905325, Blast_Score=125, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17558714, Length=160, Percent_Identity=26.25, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: 3.2.-.-

Molecular weight: Translated: 19267; Mature: 19267

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKKVLFIVGEEFEDIELLYPYYRVIEEGFRPVIAWKEANARVTGKHGYTVISDIAFKD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEHHHHCC
VRPEDYVALVIPGGRGPEHIRILEEVKNLTRKFFELKKPVAAICHGPQILISANLVKGRR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCC
LTSVTSIKDDVIAAGGIYIDNDVVVDENLISSRVPSDLPAFASTLVKALKSLK
HHHHHHHCCCCEEECCEEECCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSKKVLFIVGEEFEDIELLYPYYRVIEEGFRPVIAWKEANARVTGKHGYTVISDIAFKD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEHHHHCC
VRPEDYVALVIPGGRGPEHIRILEEVKNLTRKFFELKKPVAAICHGPQILISANLVKGRR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCC
LTSVTSIKDDVIAAGGIYIDNDVVVDENLISSRVPSDLPAFASTLVKALKSLK
HHHHHHHCCCCEEECCEEECCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]