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The map label for this gene is 227827397

Identifier: 227827397

GI number: 227827397

Start: 1061560

End: 1061895

Strand: Direct

Name: 227827397

Synonym: M1425_1116

Alternate gene names: NA

Gene position: 1061560-1061895 (Clockwise)

Preceding gene: 227827396

Following gene: 227827399

Centisome position: 40.69

GC content: 33.63

Gene sequence:

>336_bases
ATGAGTTTAAAACTTTCAGAAAGCAAAGAGGCAATAAGATGTTGTTATAAAATATCAGATACTGATGTTGAGTGCCTATT
TAAATTAGTTGAGCTTAACAGACCAATTTCCGCTGAAGAGTTAGCTTCCATAATGAAACTCAGCAAAACTACAGTTGAAA
ATAGTCTAAAGAAATTAATAGAAATAGGGTTGATAGTTAGGAATAAGGATGGAGAGGAAGGGAAGAGAATAGGGAGACCT
AAATATCTATATGCGGTAATACATAATGCTGAGACTAAAATAAAACAAGATTTAACTAGCTGTGCTTCTAAGATACTGTC
AGCAACCTCCAGTTAG

Upstream 100 bases:

>100_bases
GGGAATACATGAAAAAAATATATAATGTAAATAATCCTCCCCCAGTATCATCCTTAAAAAATAGTTAAAGTTTTAATACT
AGAAAAGATAAAATAAGTTT

Downstream 100 bases:

>100_bases
TTCGATTTTTTTAGGCTTTTCAGAACTACTACTTTCTTTTTTAATATGCATAAAAAATATCCCATCTTGTTGTGAATCCT
CAAGAACCTTGCAATTCATT

Product: TrmB family transcripitonal regulator

Products: NA

Alternate protein names: Transcriptional Regulator; HTH-Type Transcriptional Regulator Lrs

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSLKLSESKEAIRCCYKISDTDVECLFKLVELNRPISAEELASIMKLSKTTVENSLKKLIEIGLIVRNKDGEEGKRIGRP
KYLYAVIHNAETKIKQDLTSCASKILSATSS

Sequences:

>Translated_111_residues
MSLKLSESKEAIRCCYKISDTDVECLFKLVELNRPISAEELASIMKLSKTTVENSLKKLIEIGLIVRNKDGEEGKRIGRP
KYLYAVIHNAETKIKQDLTSCASKILSATSS
>Mature_110_residues
SLKLSESKEAIRCCYKISDTDVECLFKLVELNRPISAEELASIMKLSKTTVENSLKKLIEIGLIVRNKDGEEGKRIGRPK
YLYAVIHNAETKIKQDLTSCASKILSATSS

Specific function: Unknown

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12378; Mature: 12246

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKLSESKEAIRCCYKISDTDVECLFKLVELNRPISAEELASIMKLSKTTVENSLKKLI
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIGLIVRNKDGEEGKRIGRPKYLYAVIHNAETKIKQDLTSCASKILSATSS
HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLKLSESKEAIRCCYKISDTDVECLFKLVELNRPISAEELASIMKLSKTTVENSLKKLI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIGLIVRNKDGEEGKRIGRPKYLYAVIHNAETKIKQDLTSCASKILSATSS
HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA