| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is yhjX [C]
Identifier: 227827371
GI number: 227827371
Start: 1036368
End: 1037483
Strand: Direct
Name: yhjX [C]
Synonym: M1425_1090
Alternate gene names: 227827371
Gene position: 1036368-1037483 (Clockwise)
Preceding gene: 227827370
Following gene: 227827372
Centisome position: 39.73
GC content: 36.92
Gene sequence:
>1116_bases ATGAAAAGGAACAAGTACATAATTATTGGCTTCGTAATAATGTGCTTTAATTCACTTTACCAATATTCTTGGAACGCTTT AGAGCCTCTCTTAAGAGAGGGATTTAATGTTAGTGTAGTTGAGATAGCCTTAGGCTTTACGTTGTTCAGTGTATTCTCCT CTGTTTTTCAACCAATTGGGGGTCACTTTGCTGATAAACAAGGTCCAAAAAGGATAGGGGTTATCTCAGCAATTTTATCA GCAATTGGTTTTCTGGGTACTTATCTTTCCCCTAATATTTACGTCTTTTTTGTAAGCTGGTCAATAGGTAGTATAGGAGA GGGCATACTTTACGGAATAGCTGCAAACCTAGCAATGAAGTGGTTTAGGGAAAGAATGGGATTTGCAACTGGGATTGTGT CAATGGGATTTGGAATAGGTTCGGCCATAGCTAATCCCTTTATATCCATGGCTGGTAATTACAGAATAGTAACACTCGCA ATAGGATTAGTTGAGATAGTACTATTACCAATTCTCTTGTACATCTCAGATTATCCTCCTAAACTATCTGGTCAGACTCC AAGGCAAGCCGTTTTAAGTGTCAAATTCTGGCTAATCTACCTTTCTTTCGCAACTTCCATAGTTCCGCTAACAGTACTTT CTTCAGAATTACCAATACTAGGAAAAGGTTTACCTCAACAAGAATTAGTAACTTTGATCTCAATCTTACCCTTATTAAGT GGAGGATTAAGGCCAATTTTCGGCTACATTGCTGATAGATTAGGCATATTGAGAACAACGTTCCTTCTTACCATTATATT AACGTTAGGTAGTATTTCTTTACTTTTAGGGGAAATAGCACTTTCAACGATTTTAGTAGGCTTTGCAGGAGGCTCACTAA TTACACTCTATTTTAACGTTTCCACGGAGATATTCGGCTTTAAGTTTTCCACAGTGAATAGTGGTATATTATATACTGGT AAGGCTTTAGGCGGTGTGTTAGGTAGTATTATATTTGCATTGCTTTACACGATAAGTCTTAGAACCTCTGAAATATATAC TTTGTCTTGTAGCCTAATAGGAGTTCTTACCTTATTGCCACTTTTATTTACTAAGCAGAGCAGAAAGGTTCAATGA
Upstream 100 bases:
>100_bases CAAGCGCTCAAAGGTGACTTACGTAATGGTTTAAAAAATATACATGCCTTCTTTCTAGTCCTTTAGTAAGTTTTTTAACT AATTGTGAACATATCCTCTC
Downstream 100 bases:
>100_bases TTTTTTATCTTATAACCAACTAATTGTCAAGTATTACGTTAATTGATAATACCAAATTGAGATAGAACAATAGATATAGC TCTATTTAGGAAGAATTAGA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKRNKYIIIGFVIMCFNSLYQYSWNALEPLLREGFNVSVVEIALGFTLFSVFSSVFQPIGGHFADKQGPKRIGVISAILS AIGFLGTYLSPNIYVFFVSWSIGSIGEGILYGIAANLAMKWFRERMGFATGIVSMGFGIGSAIANPFISMAGNYRIVTLA IGLVEIVLLPILLYISDYPPKLSGQTPRQAVLSVKFWLIYLSFATSIVPLTVLSSELPILGKGLPQQELVTLISILPLLS GGLRPIFGYIADRLGILRTTFLLTIILTLGSISLLLGEIALSTILVGFAGGSLITLYFNVSTEIFGFKFSTVNSGILYTG KALGGVLGSIIFALLYTISLRTSEIYTLSCSLIGVLTLLPLLFTKQSRKVQ
Sequences:
>Translated_371_residues MKRNKYIIIGFVIMCFNSLYQYSWNALEPLLREGFNVSVVEIALGFTLFSVFSSVFQPIGGHFADKQGPKRIGVISAILS AIGFLGTYLSPNIYVFFVSWSIGSIGEGILYGIAANLAMKWFRERMGFATGIVSMGFGIGSAIANPFISMAGNYRIVTLA IGLVEIVLLPILLYISDYPPKLSGQTPRQAVLSVKFWLIYLSFATSIVPLTVLSSELPILGKGLPQQELVTLISILPLLS GGLRPIFGYIADRLGILRTTFLLTIILTLGSISLLLGEIALSTILVGFAGGSLITLYFNVSTEIFGFKFSTVNSGILYTG KALGGVLGSIIFALLYTISLRTSEIYTLSCSLIGVLTLLPLLFTKQSRKVQ >Mature_371_residues MKRNKYIIIGFVIMCFNSLYQYSWNALEPLLREGFNVSVVEIALGFTLFSVFSSVFQPIGGHFADKQGPKRIGVISAILS AIGFLGTYLSPNIYVFFVSWSIGSIGEGILYGIAANLAMKWFRERMGFATGIVSMGFGIGSAIANPFISMAGNYRIVTLA IGLVEIVLLPILLYISDYPPKLSGQTPRQAVLSVKFWLIYLSFATSIVPLTVLSSELPILGKGLPQQELVTLISILPLLS GGLRPIFGYIADRLGILRTTFLLTIILTLGSISLLLGEIALSTILVGFAGGSLITLYFNVSTEIFGFKFSTVNSGILYTG KALGGVLGSIIFALLYTISLRTSEIYTLSCSLIGVLTLLPLLFTKQSRKVQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=367, Percent_Identity=25.0681198910082, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40225; Mature: 40225
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNKYIIIGFVIMCFNSLYQYSWNALEPLLREGFNVSVVEIALGFTLFSVFSSVFQPIG CCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHC GHFADKQGPKRIGVISAILSAIGFLGTYLSPNIYVFFVSWSIGSIGEGILYGIAANLAMK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH WFRERMGFATGIVSMGFGIGSAIANPFISMAGNYRIVTLAIGLVEIVLLPILLYISDYPP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC KLSGQTPRQAVLSVKFWLIYLSFATSIVPLTVLSSELPILGKGLPQQELVTLISILPLLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC GGLRPIFGYIADRLGILRTTFLLTIILTLGSISLLLGEIALSTILVGFAGGSLITLYFNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC STEIFGFKFSTVNSGILYTGKALGGVLGSIIFALLYTISLRTSEIYTLSCSLIGVLTLLP CCEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH LLFTKQSRKVQ HHHCCCCCCCC >Mature Secondary Structure MKRNKYIIIGFVIMCFNSLYQYSWNALEPLLREGFNVSVVEIALGFTLFSVFSSVFQPIG CCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHC GHFADKQGPKRIGVISAILSAIGFLGTYLSPNIYVFFVSWSIGSIGEGILYGIAANLAMK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH WFRERMGFATGIVSMGFGIGSAIANPFISMAGNYRIVTLAIGLVEIVLLPILLYISDYPP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCC KLSGQTPRQAVLSVKFWLIYLSFATSIVPLTVLSSELPILGKGLPQQELVTLISILPLLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC GGLRPIFGYIADRLGILRTTFLLTIILTLGSISLLLGEIALSTILVGFAGGSLITLYFNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC STEIFGFKFSTVNSGILYTGKALGGVLGSIIFALLYTISLRTSEIYTLSCSLIGVLTLLP CCEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH LLFTKQSRKVQ HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2439991 [H]