| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227827275
Identifier: 227827275
GI number: 227827275
Start: 922148
End: 922636
Strand: Direct
Name: 227827275
Synonym: M1425_0974
Alternate gene names: NA
Gene position: 922148-922636 (Clockwise)
Preceding gene: 227827274
Following gene: 227827277
Centisome position: 35.35
GC content: 30.06
Gene sequence:
>489_bases ATGATAATTCTAGATACATCATTTCTTTACTCGTTTCTTAATAAAAAAGAGGAAAATCATGATATTGCAGTAAGATTAAT GAGGAAAATATTAAATAATAATTTTGGAATGCCAGTAATATTTGAATACGTATTAGACGAGTTGCTAACCATTATGGTTA ACAGACAACCATTTGAATATGTTGATAAGACTCTACGTACAATCTTAAACTATATTAATGCAAGATCTTTTGAGATGATC ACGCTGTCTGGAGAAGAGCATATTTCAAAAGTTATAGCATTATTCAGAAAAATAAATGGAGATCCAAATAGGAATAAGAA ATTAAGCTTTACCGATTGCGCAATACTTTTTGTAATGATAGAAAATGGAATTCAGTATTTGTCTACCTTTGACTCCGGTT TCAGTGGTCTACTTGAAAAACTTGAAGATGGAATTTATACATTAACTGAGAGGAAAAAGCACGAACTGGAAAGAATTCTA ATGACGTAA
Upstream 100 bases:
>100_bases TAAGCAGAGAGGAGAAAGTGGTAGAAGTAAAGAACCCTTGTGAAAAGGGAGAAAGAAAAAAAGAAGAAATATTTGACCTT ATTACAGAGTGGAAAGACTA
Downstream 100 bases:
>100_bases ACTGATGCCAAGCTAGATAATAAGAAATATATTTCTGAAGCGTCGTAGGTAATTTACACTAACCGAGTTACTTTTACCTG CTAATAACGAGTAAGAGATA
Product: PilT protein domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIILDTSFLYSFLNKKEENHDIAVRLMRKILNNNFGMPVIFEYVLDELLTIMVNRQPFEYVDKTLRTILNYINARSFEMI TLSGEEHISKVIALFRKINGDPNRNKKLSFTDCAILFVMIENGIQYLSTFDSGFSGLLEKLEDGIYTLTERKKHELERIL MT
Sequences:
>Translated_162_residues MIILDTSFLYSFLNKKEENHDIAVRLMRKILNNNFGMPVIFEYVLDELLTIMVNRQPFEYVDKTLRTILNYINARSFEMI TLSGEEHISKVIALFRKINGDPNRNKKLSFTDCAILFVMIENGIQYLSTFDSGFSGLLEKLEDGIYTLTERKKHELERIL MT >Mature_162_residues MIILDTSFLYSFLNKKEENHDIAVRLMRKILNNNFGMPVIFEYVLDELLTIMVNRQPFEYVDKTLRTILNYINARSFEMI TLSGEEHISKVIALFRKINGDPNRNKKLSFTDCAILFVMIENGIQYLSTFDSGFSGLLEKLEDGIYTLTERKKHELERIL MT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18982; Mature: 18982
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILDTSFLYSFLNKKEENHDIAVRLMRKILNNNFGMPVIFEYVLDELLTIMVNRQPFEY CEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH VDKTLRTILNYINARSFEMITLSGEEHISKVIALFRKINGDPNRNKKLSFTDCAILFVMI HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ENGIQYLSTFDSGFSGLLEKLEDGIYTLTERKKHELERILMT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIILDTSFLYSFLNKKEENHDIAVRLMRKILNNNFGMPVIFEYVLDELLTIMVNRQPFEY CEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH VDKTLRTILNYINARSFEMITLSGEEHISKVIALFRKINGDPNRNKKLSFTDCAILFVMI HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ENGIQYLSTFDSGFSGLLEKLEDGIYTLTERKKHELERILMT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA