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The map label for this gene is 227827184

Identifier: 227827184

GI number: 227827184

Start: 818813

End: 819598

Strand: Direct

Name: 227827184

Synonym: M1425_0865

Alternate gene names: NA

Gene position: 818813-819598 (Clockwise)

Preceding gene: 227827181

Following gene: 227827185

Centisome position: 31.39

GC content: 41.86

Gene sequence:

>786_bases
GTGATTTACACACTTACATTCCGATTAAAACCCTCAAATGACGTAATTGTTCCGCCTTTCACTTCTAAGCTCAGTAGGAC
GTTGTTTTTATCCTTTTCCCCCACATACTCGAAGATTATAGAGAGCAAGAAGCCGAATAAACCCTTGAGGATAACTGTTG
TAAAGGACCAAGGCAGACCCTTATACTCAAACGGGAAGAGTAAAGTGGTGCTAAAGGCTGAGAACACCTACACCTTTATC
GTAAACACTCTGTTGGAGGATGTGGTAAAGGAGGTAATAAAGGCTGAGAGCGTCAATAGGGAAATTTACAACACTAGTTT
TCACGTAGAGTTGGAGAACGTTTCAGTAAAGGAAAACATCATGGTAGAGGACGCCAGGTTTTACAGAGTTCACTTCAAGA
CGCCTACGCTCTTACAACCCCCCCGGCCTAGGATAAAAAGAAAGGAGAACAGATACGTGTTATTCCCTTACGTTCCACTC
CTCTTCTACTCCACAGTCTCCCACTGGAATACATATATGGATAAGAAGATCGTTGGAGTTACTGGTAGTAAGACGTTATA
CTACTTTAGAGAGGTTAACTATAGGATAAGACCGATGACTGCTTATTACGGAAACATACCTAATAAGGGGTTTGTGGGAT
GGGTTGTGTTTGAGTTGAGTGCTAGAAAAGGCAGTAAGATAAGGGAGAACGTTAGGAGGTTATTGGATTACGTAAATTAC
TTCGGCGTGGGAAAGAGTAGGAACATTGGCTTTGGAGAGGTAGAAGTAAAACCACTTAATGGTTAA

Upstream 100 bases:

>100_bases
ACAGTCCCGTTTATGACGCATTGAAAACTCTTCTCCGTGAATACCTAATGAACCACTATTTCGAGTTAAGTTTAAAGTTA
CGTTAATCCATTAATATACT

Downstream 100 bases:

>100_bases
TGAAACGTTATTTTCTAGCTCTAGTAGAGGATTATTTTACTTAAACTCTATTGCGCTATCGTCTTTCTATTCCTTCAAAG
ATTAATCAGTATTTACTTTA

Product: CRISPR-associated protein Cas6

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIYTLTFRLKPSNDVIVPPFTSKLSRTLFLSFSPTYSKIIESKKPNKPLRITVVKDQGRPLYSNGKSKVVLKAENTYTFI
VNTLLEDVVKEVIKAESVNREIYNTSFHVELENVSVKENIMVEDARFYRVHFKTPTLLQPPRPRIKRKENRYVLFPYVPL
LFYSTVSHWNTYMDKKIVGVTGSKTLYYFREVNYRIRPMTAYYGNIPNKGFVGWVVFELSARKGSKIRENVRRLLDYVNY
FGVGKSRNIGFGEVEVKPLNG

Sequences:

>Translated_261_residues
MIYTLTFRLKPSNDVIVPPFTSKLSRTLFLSFSPTYSKIIESKKPNKPLRITVVKDQGRPLYSNGKSKVVLKAENTYTFI
VNTLLEDVVKEVIKAESVNREIYNTSFHVELENVSVKENIMVEDARFYRVHFKTPTLLQPPRPRIKRKENRYVLFPYVPL
LFYSTVSHWNTYMDKKIVGVTGSKTLYYFREVNYRIRPMTAYYGNIPNKGFVGWVVFELSARKGSKIRENVRRLLDYVNY
FGVGKSRNIGFGEVEVKPLNG
>Mature_261_residues
MIYTLTFRLKPSNDVIVPPFTSKLSRTLFLSFSPTYSKIIESKKPNKPLRITVVKDQGRPLYSNGKSKVVLKAENTYTFI
VNTLLEDVVKEVIKAESVNREIYNTSFHVELENVSVKENIMVEDARFYRVHFKTPTLLQPPRPRIKRKENRYVLFPYVPL
LFYSTVSHWNTYMDKKIVGVTGSKTLYYFREVNYRIRPMTAYYGNIPNKGFVGWVVFELSARKGSKIRENVRRLLDYVNY
FGVGKSRNIGFGEVEVKPLNG

Specific function: Unknown

COG id: COG5551

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30404; Mature: 30404

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTLTFRLKPSNDVIVPPFTSKLSRTLFLSFSPTYSKIIESKKPNKPLRITVVKDQGRP
CEEEEEEEEECCCCEEECCCHHCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCE
LYSNGKSKVVLKAENTYTFIVNTLLEDVVKEVIKAESVNREIYNTSFHVELENVSVKENI
EECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCEEECCE
MVEDARFYRVHFKTPTLLQPPRPRIKRKENRYVLFPYVPLLFYSTVSHWNTYMDKKIVGV
EEECEEEEEEEECCCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEE
TGSKTLYYFREVNYRIRPMTAYYGNIPNKGFVGWVVFELSARKGSKIRENVRRLLDYVNY
CCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHH
FGVGKSRNIGFGEVEVKPLNG
HCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MIYTLTFRLKPSNDVIVPPFTSKLSRTLFLSFSPTYSKIIESKKPNKPLRITVVKDQGRP
CEEEEEEEEECCCCEEECCCHHCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCE
LYSNGKSKVVLKAENTYTFIVNTLLEDVVKEVIKAESVNREIYNTSFHVELENVSVKENI
EECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCEEECCE
MVEDARFYRVHFKTPTLLQPPRPRIKRKENRYVLFPYVPLLFYSTVSHWNTYMDKKIVGV
EEECEEEEEEEECCCCCCCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEE
TGSKTLYYFREVNYRIRPMTAYYGNIPNKGFVGWVVFELSARKGSKIRENVRRLLDYVNY
CCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHH
FGVGKSRNIGFGEVEVKPLNG
HCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA