Click here to switch to the map view.

The map label for this gene is 227826728

Identifier: 227826728

GI number: 227826728

Start: 285279

End: 285452

Strand: Direct

Name: 227826728

Synonym: M1425_0324

Alternate gene names: NA

Gene position: 285279-285452 (Clockwise)

Preceding gene: 227826725

Following gene: 227826733

Centisome position: 10.94

GC content: 37.93

Gene sequence:

>174_bases
ATGTATTTCCAAGACAAATACTACGAGTTTCCTAATGATAGGCAAGCGTTTGAGGATATAAGGAAGATCTTGCCTAAGGG
TTGCAAAGTGGATATAGAAAGTACTGGAGTTTACCACGTTAACCTAGCAAAGTACTTGATGGGTGAGTATGATGTTAGGA
TTATTAATCCCTAG

Upstream 100 bases:

>100_bases
GCTTGGTCGCCTCTGATCCGGAAGTTGGGCATAAAGCCCGAATAAGGGTAAATTTGGAGGCCCCAGTTGCAGGAATAGAT
GATCAAAAGATAAAGTAGTC

Downstream 100 bases:

>100_bases
TATTTCCGGAAAGTCTTTAGACCTCAATTTTATCTAATCCTAAGTATTTTATTGCATTAAGATTAAACTTATACTTATTT
TCCTCAAAGAACTGTTTAAT

Product: transposase fragment in ISC1190

Products: NA

Alternate protein names: Partial Transposase In ISC; Transposase Fragment In ISC; Transposon ISC; Transposon; ORF1 In Transposon ISC

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MYFQDKYYEFPNDRQAFEDIRKILPKGCKVDIESTGVYHVNLAKYLMGEYDVRIINP

Sequences:

>Translated_57_residues
MYFQDKYYEFPNDRQAFEDIRKILPKGCKVDIESTGVYHVNLAKYLMGEYDVRIINP
>Mature_57_residues
MYFQDKYYEFPNDRQAFEDIRKILPKGCKVDIESTGVYHVNLAKYLMGEYDVRIINP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6836; Mature: 6836

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFQDKYYEFPNDRQAFEDIRKILPKGCKVDIESTGVYHVNLAKYLMGEYDVRIINP
CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHCCCCCEEEECC
>Mature Secondary Structure
MYFQDKYYEFPNDRQAFEDIRKILPKGCKVDIESTGVYHVNLAKYLMGEYDVRIINP
CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA