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The map label for this gene is vdlD [H]

Identifier: 227826509

GI number: 227826509

Start: 85533

End: 86489

Strand: Direct

Name: vdlD [H]

Synonym: M1425_0098

Alternate gene names: 227826509

Gene position: 85533-86489 (Clockwise)

Preceding gene: 227826508

Following gene: 227826511

Centisome position: 3.28

GC content: 35.63

Gene sequence:

>957_bases
ATGTCATACTTGAAAATCTCTGATACTACTATTGAAACATTTAGATTTATCCATTATGAACAATCTAACTTTTTAAATAG
ACTACATGGGGGTGACATGCTATTCTTTCTAGTAGAGGCTGGTATGTTATCTGCTACTAAGGTTGCGATGGGTACTACGG
TTTTAGCCTCACTTGACGATGTTATATTTAAAAAACCAGTTAAACTAGGCGATATAGTTAAAGTAAGGGCTGAAACGGTA
TATGTAGGTAATACTTCGCTTGAAGTAGAGGTCAGTGCGTTTGATAGAGACGAAGAAGTTGTTTCAGCTTACGCTACATA
CGTTAAAGTTGACGATTTGCTAAGGCCCGCTCCAGTTAACGTAAAGATCATAGCAGAAAGCGAAGATGATAAGAGAAAAA
TGGATGAGGCTAAGAGGAGAAGAGAGAATAGGCTATCTAAAATACTAAATAGGCAGAAGATGAGGTTTTATGTGGATGAT
ATCACTGATGGATTAAGATATAGGATAAGCAATGTGGTCCACGTATCCCCAGAGTTAACATATGATGGCAGAATAATGTC
AGCTGGTAAACTACTGAAACTTATGGATGATCTTGGAGGGATAATTTGTTTAAACTATATAAACTATAATAGTAAAAATA
TTTATGATAATGTTTTCAACGCCGTAGTCACAGTAGCGGTAAAGGGATTAGCGTTTTACTCTCCCATAAGACTTAATGAT
ATTGTAACAATCAGAGCAGGACTTATTTATGTAGGTAATACTTCTGCCGACATCTTAATTAACGTAATTAGAGAAGATGT
AAATGGTACAAAGGAACACGTAGCTACTGCATATTTTACATATGTTAGAGTTGATAAGGAAGGAAAACCCATTAAAATGC
CAGAATATGTACCCGTTACGGAAAGAGAAAAAAGACTTCATGAAGAAGCACTAACACGTAGAGGTTTGCGTAAATAA

Upstream 100 bases:

>100_bases
AACCTTGATTGGAAAGGAGTTTTAAGGCAACTAAGGGATATAGCCTTGGAGTATGCAAAAAGAGATAAAAATTTTGACAA
AATAGCTGATATGGTTAATC

Downstream 100 bases:

>100_bases
ATATATAGTAGGAATAATGAAAGCGCGAAAGAATAGAACGAAATTTGATACCCAGACACTATATTGTTAGTAGAACCCGA
TAAGAATCCTCCAACAACAT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSYLKISDTTIETFRFIHYEQSNFLNRLHGGDMLFFLVEAGMLSATKVAMGTTVLASLDDVIFKKPVKLGDIVKVRAETV
YVGNTSLEVEVSAFDRDEEVVSAYATYVKVDDLLRPAPVNVKIIAESEDDKRKMDEAKRRRENRLSKILNRQKMRFYVDD
ITDGLRYRISNVVHVSPELTYDGRIMSAGKLLKLMDDLGGIICLNYINYNSKNIYDNVFNAVVTVAVKGLAFYSPIRLND
IVTIRAGLIYVGNTSADILINVIREDVNGTKEHVATAYFTYVRVDKEGKPIKMPEYVPVTEREKRLHEEALTRRGLRK

Sequences:

>Translated_318_residues
MSYLKISDTTIETFRFIHYEQSNFLNRLHGGDMLFFLVEAGMLSATKVAMGTTVLASLDDVIFKKPVKLGDIVKVRAETV
YVGNTSLEVEVSAFDRDEEVVSAYATYVKVDDLLRPAPVNVKIIAESEDDKRKMDEAKRRRENRLSKILNRQKMRFYVDD
ITDGLRYRISNVVHVSPELTYDGRIMSAGKLLKLMDDLGGIICLNYINYNSKNIYDNVFNAVVTVAVKGLAFYSPIRLND
IVTIRAGLIYVGNTSADILINVIREDVNGTKEHVATAYFTYVRVDKEGKPIKMPEYVPVTEREKRLHEEALTRRGLRK
>Mature_317_residues
SYLKISDTTIETFRFIHYEQSNFLNRLHGGDMLFFLVEAGMLSATKVAMGTTVLASLDDVIFKKPVKLGDIVKVRAETVY
VGNTSLEVEVSAFDRDEEVVSAYATYVKVDDLLRPAPVNVKIIAESEDDKRKMDEAKRRRENRLSKILNRQKMRFYVDDI
TDGLRYRISNVVHVSPELTYDGRIMSAGKLLKLMDDLGGIICLNYINYNSKNIYDNVFNAVVTVAVKGLAFYSPIRLNDI
VTIRAGLIYVGNTSADILINVIREDVNGTKEHVATAYFTYVRVDKEGKPIKMPEYVPVTEREKRLHEEALTRRGLRK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI75709208, Length=329, Percent_Identity=27.0516717325228, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI32528282, Length=323, Percent_Identity=27.5541795665635, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI32528286, Length=321, Percent_Identity=27.4143302180685, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI32528284, Length=314, Percent_Identity=27.7070063694268, Blast_Score=99, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 36192; Mature: 36061

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLKISDTTIETFRFIHYEQSNFLNRLHGGDMLFFLVEAGMLSATKVAMGTTVLASLDD
CCEEEECCCCEEHHHEEEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VIFKKPVKLGDIVKVRAETVYVGNTSLEVEVSAFDRDEEVVSAYATYVKVDDLLRPAPVN
HHHHCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
VKIIAESEDDKRKMDEAKRRRENRLSKILNRQKMRFYVDDITDGLRYRISNVVHVSPELT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCEEEECCCCE
YDGRIMSAGKLLKLMDDLGGIICLNYINYNSKNIYDNVFNAVVTVAVKGLAFYSPIRLND
ECCEEECHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC
IVTIRAGLIYVGNTSADILINVIREDVNGTKEHVATAYFTYVRVDKEGKPIKMPEYVPVT
EEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCCC
EREKRLHEEALTRRGLRK
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SYLKISDTTIETFRFIHYEQSNFLNRLHGGDMLFFLVEAGMLSATKVAMGTTVLASLDD
CEEEECCCCEEHHHEEEECHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VIFKKPVKLGDIVKVRAETVYVGNTSLEVEVSAFDRDEEVVSAYATYVKVDDLLRPAPVN
HHHHCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
VKIIAESEDDKRKMDEAKRRRENRLSKILNRQKMRFYVDDITDGLRYRISNVVHVSPELT
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCEEEECCCCE
YDGRIMSAGKLLKLMDDLGGIICLNYINYNSKNIYDNVFNAVVTVAVKGLAFYSPIRLND
ECCEEECHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC
IVTIRAGLIYVGNTSADILINVIREDVNGTKEHVATAYFTYVRVDKEGKPIKMPEYVPVT
EEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCCC
EREKRLHEEALTRRGLRK
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]