Definition Sinorhizobium fredii NGR234 chromosome, complete genome.
Accession NC_012587
Length 3,925,702

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 227823893

GI number:

Start: 3572650

End: 3576219

Strand: Reverse

Name: Not Available

Synonym: NGR_c33830

Alternate gene names: NA

Gene position: NA

Preceding gene: 227823894

Following gene: 227823892

Centisome position: NA

GC content: NA

Gene sequence:

>3570_bases
ATGAGGAATGACACCTTCGGGACGGAGGAGAGGACGCCCAAGGCGTGGCTCGACTGGACGACGGAGCGCCAGTCGCTCGC
CTCCGACCCGGCCCGATCGGCCTGGGTGTCGGCCAATGCCGGCTCCGGCAAGACGCATGTGCTGACGCAGCGGGTCATCC
GGCTGCTGCTCGCCGGGTGCCGGCCATCCGCGATCCTCTGCCTGACCTATACGAAGGCGGCGGCTTCCGAGATGTCGAAC
CGCATCTTCGAGCGCCTCGCCGAATGGGCGACGCTCGATGATGCCGCGCTTGAAAAACGGATCGAGACGATCGAGGGCAA
ACGGCCTCCCCTTGCGAAGATCCACGAAGCCCGGCGGCTTTTTGCAAAGGCGCTCGAAACGCCCGGCGGGCTGAAGATCC
AGACGATCCACGCCTTCTCCGAGGCCTTGCTGCACCAATTTCCGCTCGAAGCCAACGTGGCGGGACATTTTTCGGTCCTC
GACGATCGTGCCGCGGCTGTGTTGCTTGCCGATGCGCGCCGCGCCCTGCTGAGCGCGACGGCCGCCGAGGGCGAGACCGA
GCTTGCCGAGGCCTTCGCAACGGTCCTCGATCTCGCCGACGATACCGGCCTTGAAAAACTGCTTCAGGCGATCGTCGCAA
ACCGCGCGCCCATCCAGGCCTTTCTCGACCACGCCTCCGCGCAAAGCGGGCGCGAACGGCAACTGCGTGCGGCGCTTGGC
CTTGCTCCGACGGAATCGGCCGAGAGCGTCATGGCCGGCGCCTGGCCGCTGGCCGGTCTGAACGGCGCTGCGCTTGAGCA
ATATATCGGGCTCGCGCTCAGCCTCGGCGGCGCGAAACCCGTCGAAATCGCCGAGGGCCTGAAGGCAGCCTGCAAGGTCA
AGGACGCGGAGGAGCGCTTCGCCTCGCTGCTGAGCGTGTTCTTCAACGGCGGCGGCAAGCCGAAGGCCGAGTCTGCCTTC
TTCAACAAGGCGATGCTGGCGCAGGCGCCGCATCTCGCACCGCTGATCGACGAAGCACGCCAACACATCGTCTCAACTGC
CGATCGCCTCAGCATCGTGCGCATGTATGAGGCGACGCGGGCGGCACTGATCCTCGCGGAAAGGCTCAACGGGGATTACG
AAGACCTCAAGAAGCGGCGCAGCCAGCTCGATTTCGAGGACCTGATCAACCGCACGGCCGCGCTGCTTTCGCGCAGCGAC
GTCGGCGCCTGGGTCCACTACAAGCTCGACCAGGGCATCGACCATATCCTCGTCGACGAGGCGCAGGACACCAGCCCGGC
GCAATGGACGATCATCCAGGCGCTCGCCGCCGATTTCTTCGCCGGCGAAACAGCGCGGGCCGACGACCGGACGATCTTTG
CGGTCGGCGACGAGAAGCAGTCGATCTATTCCTTCCAGGGCGCTCGGCCGGAGCGCTTTTCGCGCGAAAGCGTGCTGACC
GAGCGTCGGGTCCGCGCCGGCAACAAGTATTTCAGCCCGATCCGGCTGCAGCTCTCCTTCCGCTCCACCCTCGACGTGCT
TTCCGCAGTCGACACGGTCTTTGCCAACCCGGGCAATGCCAAAGGCCTGAGCGCCAGGAACGAGGCAATCGTCCATGCCT
CGAACCGCATCGGCCACCCCGGAGCGGTCGACATCTGGGACATCATCGCGCCCGAGCCGACCACCTCCGAAGACGACTGG
ACGGCACCCTTCGACGCGACGCCCGAGCGGGCCCCGGTCAACATTCTCGCCCGGCGGATCGCGGCCGTGCTCGAAGACTG
GATCGGCAAGGAGACCGTGATCGAGAAGGGCGTCCGGCGGCCGATGCGGCCCGGCGACGTCATCGTGCTGGTGCGCAAGC
GCGATGCCTTCGTCAACGCGCTGACGCGGGCGCTGAAGCGCCGCGGCAACATTCCAGTCGCCGGTGCCGACAGGCTGGTA
CTGACCAACCACATCGCCATCCAGGATCTCCTGGCGCTCGGCCGCTTCGTGCTCCTGCCCGAAGATGACCTGTCGCTCGC
CGCACTGCTGAAAAGCCCGCTCGTCAATCTCGGCGAGGACGACGTCTTCGACCTGGCGGCGCGGCGGGCGGAGGGCGAAA
GCCTCTGGCAGCGGCTGCAGCAGCTCGGTGCGGAGGAAAAAAGCCGATATTGCCGCGTCGTGCGGATCCTCGCCGGCTAT
GGCGAACTTGCCCGCGATCTGCTGCCGCACGACTTCTACGCCCGGGTGCTCGGCGCCCATGGCGGCCGACGTGCCTTCCT
GGCGCGGCTCGGCAGCGAGGTCAGCGACATTCTCGACGAATTCCTCACCTTCGCGCTCGACCACGAGCGGAGCGGCCTGC
CCGGCCTGCAGGCCTTCATCTCGACGCTCGAGATCGAAGCGCCGACCGTCAAGCGCGAGCAGGACAAGGAACGCGACGAG
GTGCGCGTCATGACCGTGCACGCCGCCAAGGGGCTCGAGGCACCGGTGGTCTTCCTGGTCGACGGCGGCGGCGAGGCATT
CGTACGCCAGCAGGTCTCGGACCTGCGCCTCCTGGAGAAGCCGCAGGCCGGCGGCGCTCCGGTCATCGTGCCGGTCTGGC
GGGCGCCCGGCTCGGCGTCCAATTCGCTGATCGCCGCCGACAACGAGCGGCTGAAGCGGCTGGCGGAGGAAGAGTATCGC
CGCCTCCTCTATGTCGGCATGACACGGGCGGCGGATCGGCTGATCGTCTGCGGTTATCGCGGCCAGCGGCAGAACCTCGA
TACCTGGCATGCCATGGTCCAGGGGACGCTGGCGCACGATCCGAAAGGCAGGGCGGTGCCGACGGACTTTTCAGCCGGCG
GCGAAGAATGGACGGGCCATGCCTGGCGTGAAGCGCCTGTGCCGGTAACCATCCCGGAGAGTGGCGACGCAAAGAGCAAG
CCGGACGCGGCTGCGTCGATCCTGCCGCCGGCGCTCTTCACGCCCTTGCCGCCGCCGCGCCGCCTGCCGCGGCCGCTCGC
CCCTTCTGGTACCAGCGTCGCCATCGACGATCCGGACCGGGAGGCGATCGTCGGCTCGGCGCTCTTTGCCGAGCAGGCCA
CGCCCAAATTCTCGATGCTGCGCGGCGCCATCCTGCACCGGCTGCTGCAGGTGCTCCCGACGATCGAGGAGGCTAAGCGC
CGGGAGGCGGCGGAACGCTACCTTGGGCGCGCCGTGCCGGGCTGGCCGGAGACGGAGCGGCGGGCGCTGACCGCCGCCGT
AATGGATGTGCTCGATCATACGGAACTGCAGCCGCTCTTCGGCGAACAGAGCCGAGCCGAAGTCTCCGTCATGGGAACGC
TCAAGCTCGGGAGCCAGGAGTTCGCAATATCCGGCCGCCTCGACCGCCTGGCGATTGCCGGCGACACGGTGACGATCGCC
GATTACAAGACCAATCGCGACGTGCCGGCCTCGGTCGACGACGTTCCGTCCGTCTACCGACGGCAGCTCGCCATCTACCG
TGATCTGCTGAAGCCGCTCTATCCCGGCAAGCAATTCCGCTCAGTGCTGATCTTCACGGAGGGTCCGGCCGTCCGGGTGC
TTCCCGACACGATGCTGGATCGGAGCCTTGAAGAGCTCGCGACAAAGTGA

Upstream 100 bases:

>100_bases
GCCTCGCGCCTGATCGTCCAGAAGGAACGGGACTACGGCGGTGAATACGACCACCTGGCACGCGTCGCGGAATGGGCGAC
GGCCGACGGGGAGGACGACG

Downstream 100 bases:

>100_bases
GATACACGATATTGAAAATCCGGTGGCGAGGCCTCACATGAGGCACAACATCTGGACAATGCCATTCCGAAGGAGCAGCC
GATGGCAACTGTAAAAGTCG

Product: DNA helicase (double-strand break repair), AddA type

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1189_residues
MRNDTFGTEERTPKAWLDWTTERQSLASDPARSAWVSANAGSGKTHVLTQRVIRLLLAGCRPSAILCLTYTKAAASEMSN
RIFERLAEWATLDDAALEKRIETIEGKRPPLAKIHEARRLFAKALETPGGLKIQTIHAFSEALLHQFPLEANVAGHFSVL
DDRAAAVLLADARRALLSATAAEGETELAEAFATVLDLADDTGLEKLLQAIVANRAPIQAFLDHASAQSGRERQLRAALG
LAPTESAESVMAGAWPLAGLNGAALEQYIGLALSLGGAKPVEIAEGLKAACKVKDAEERFASLLSVFFNGGGKPKAESAF
FNKAMLAQAPHLAPLIDEARQHIVSTADRLSIVRMYEATRAALILAERLNGDYEDLKKRRSQLDFEDLINRTAALLSRSD
VGAWVHYKLDQGIDHILVDEAQDTSPAQWTIIQALAADFFAGETARADDRTIFAVGDEKQSIYSFQGARPERFSRESVLT
ERRVRAGNKYFSPIRLQLSFRSTLDVLSAVDTVFANPGNAKGLSARNEAIVHASNRIGHPGAVDIWDIIAPEPTTSEDDW
TAPFDATPERAPVNILARRIAAVLEDWIGKETVIEKGVRRPMRPGDVIVLVRKRDAFVNALTRALKRRGNIPVAGADRLV
LTNHIAIQDLLALGRFVLLPEDDLSLAALLKSPLVNLGEDDVFDLAARRAEGESLWQRLQQLGAEEKSRYCRVVRILAGY
GELARDLLPHDFYARVLGAHGGRRAFLARLGSEVSDILDEFLTFALDHERSGLPGLQAFISTLEIEAPTVKREQDKERDE
VRVMTVHAAKGLEAPVVFLVDGGGEAFVRQQVSDLRLLEKPQAGGAPVIVPVWRAPGSASNSLIAADNERLKRLAEEEYR
RLLYVGMTRAADRLIVCGYRGQRQNLDTWHAMVQGTLAHDPKGRAVPTDFSAGGEEWTGHAWREAPVPVTIPESGDAKSK
PDAAASILPPALFTPLPPPRRLPRPLAPSGTSVAIDDPDREAIVGSALFAEQATPKFSMLRGAILHRLLQVLPTIEEAKR
REAAERYLGRAVPGWPETERRALTAAVMDVLDHTELQPLFGEQSRAEVSVMGTLKLGSQEFAISGRLDRLAIAGDTVTIA
DYKTNRDVPASVDDVPSVYRRQLAIYRDLLKPLYPGKQFRSVLIFTEGPAVRVLPDTMLDRSLEELATK

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA