| Definition | Sinorhizobium fredii NGR234 chromosome, complete genome. |
|---|---|
| Accession | NC_012587 |
| Length | 3,925,702 |
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Identifier: 227823529
GI number:
Start: 3155807
End: 3158137
Strand: Direct
Name: Not Available
Synonym: NGR_c30060
Alternate gene names: NA
Gene position: NA
Preceding gene: 227823528
Following gene: 227823530
Centisome position: NA
GC content: NA
Gene sequence:
>2331_bases ATGACCGACGACCGCGATCAATCCTGGAAGCAATTCGCAACGAGGGGCGACGAGGCTGCGGGCGAGGCGGAGTCCGCGCC GCAGGCCCTGGATATCGAGGCGGCCCGGCAGCAATTGCTCCGCAGAATCGACCGCAGGGAAGACGTTTTGGATCGCACTG TTAAGGAGTTCGACGAGGTGATTGACCATCTTCGCGGCGCGGCGGCCGCAAGAACCAGCCAGGAACCCAAGCGTGAGGAG GCGTCCGCACCGCTCGCTTCCGAACGGCGTGCCGCGGCGCCGACCGAGGTTACCCAACAGACACGGACGCCCCCGCTGAC GGCCGACAACGCGAACACCGCGAAAATCGTCCCTGGTCCTCAGGGCGGCGATGCCGGCCAGCGTGCCCCTGTGCAGGAGG CCCGCAAGCCCGAGCCGCGCTTCGAAAAGCCGGCTGCCGAGCCCCGGGCCGAAGTCACGGACAAGACTTCGAGACCGGGA ATGGTGGTGATCGACGGCGACCGCGGCCCCGTCAAGGCCGAGCCACGGATCCCCGACAAGGGGGGCTCCGGCGGCGGGGG CGGCGGGGGCCATGGTGGCGGAGGGGGCGGCGTCTTCCATAAGCGCCTCGGGCCGGTCGACTTTTCCGCCAGTCTCAAGG CCGGTCTGCGGGCGATCAAGCAGAACCTGATGGTCGTGATGGTTTTCACGCTCGCCACCAACGTGCTGGTGCTCGCCATA CCAGTCTATCTGTTTCAGATCTCGGACCGGGTGCTGACCAGCCGCTCGATCGACACGCTGGTCATGCTGACCGGACTGAT CGTCGCTGCGGTCATTCTGCAAGCCATTTTCGACGGAATTCGCCGCATGATCCTGATGCGGACGGCGGTGGAGGTTGCCG CTCAGCTCGGCGCGCCGATCCTCAGTGCGGCCGCCCGCGCCTCGCTGCACAGCAACGGGCGCGAATACCAGACCCTTGGC GATCTGCAGCAGCTTCGTTCCTTCCTGGTATCGAGCACATTGCTTTCCTTCCTCGACGCCCCGATCGCCCCGTTCTTCGT CCTGGCGGTCTTCCTGATCCATCCGCATCTTGGCTCGATCGTCATCGCCTCGGCCTTGCTTCTGCTGGTCGTCACCTTGT TGAACCAGAGGGCGACGGCCGCTCCCTTCGGCGAGGCCAGCAGCTTCCAGAGCAAGGCGAACCTCCATCTCGACTCGATG TCGCGCAATTCGCAGATCATCAATGCCCTTGCGATGATCCCGGAAGCGGTCCGTATTTGGGGCAAGGACATGGCAGGCTC GCTCAGGGCGCAAGTGCTGGCGCAGGATCGCAATATCGCTCTTGCCTCGCTCTCCAAGGCCGTTCGGCTGCTCACCCAGG TCATGATGCTCGGCTGGGGCGCCAATCTCGCCCTTCACGGCGAGCTCACGGGCGGCATGGTGATCGCGGCATCGATTGTC GCCGGCCGTGCGCTCGGCCCGATCGAAGGGGCGATCGAAGGCTGGCACCAGGTCGTTCAGTCACGCGCCGCCTATGGGCG CATCGCTTCGCTGCTGCAGAACTCGCCGCTGAATTTCGAGCGGCTGAAGCTGCCCCGCCCTGAAGGTCGCCTCGACGTCG AGCGGCTGCTCTTCGTCCCGAATGGCACGAAGCGCGTCGTTCTCAACGGCGTGACCTTCGCGCTCAGCCCGGGCGACTCG CTTGCCGTGATCGGCAGTTCCGGAGCAGGCAAGACGACGCTCGGCAAGATGCTCGTCGGGTCCATCCTGCCGACATCCGG CAATGTCCGGCTCGATCTCATGGACCTGAGAAACTGGGACCAGCGCCAGTTCGGCGAAAGCATCGGCTACCTGCCACAGG ACGTTCAGCTCTTTCCGGGAACGATCAAGGCCAACATCGCCCGCATGCAGGATGACGCCACGGACGCCGACATCTACGCG GCCGCGAAGCTCGCCGACGTCCACGACATGATCGCGTTGCTGCCGCACGGATACGAAACCTTCGTGGCAGCGGACGGATC CCCGCTCTCCGGCGGGCAGAAGCAGCGCGTCGCGCTCGCCCGGGCCTTCTTCGGCAATCCGCGCATGGTGGTGCTGGACG AGCCGAATTCCAATCTCGACAGCGCCGGCGAGGCTGCACTGACGCGGGCGCTTGCCCATGCGAAGAAGCAGAAAATCACC GTCATTACCATTACCCAGCGGCCCGCCCTCTTGAACAGCGTGGACAAGGTATTGCTCCTGGTGAACGGCACCGTGGCGCT CTTCGGCATGCGCCAGGATGTCCTGAAGGCCCTTTCGTCGCGCGGCATGAATCTTGAGGGCAACCCGCTCGACCACAACC AGCTTACGTAG
Upstream 100 bases:
>100_bases ACGGGCCCCAGCACCCGGATCATGCGCCGCCTCCGCTCGATACGACCAATGCCGATCCCATGCATAGCATGCTGGCCTGA TCGGAGCGCGGGAGGCGACG
Downstream 100 bases:
>100_bases GCAAACCATGTCGGACATAGTCAAAGTTTACGATCTCGAATGGTATGCAGAGGTACCGCGGTCGATCTGGAAACAGACCA TCGCCGGCGTGGCGCTCATG
Product: putative Type I secretion system ATPase, PrtD
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>776_residues MTDDRDQSWKQFATRGDEAAGEAESAPQALDIEAARQQLLRRIDRREDVLDRTVKEFDEVIDHLRGAAAARTSQEPKREE ASAPLASERRAAAPTEVTQQTRTPPLTADNANTAKIVPGPQGGDAGQRAPVQEARKPEPRFEKPAAEPRAEVTDKTSRPG MVVIDGDRGPVKAEPRIPDKGGSGGGGGGGHGGGGGGVFHKRLGPVDFSASLKAGLRAIKQNLMVVMVFTLATNVLVLAI PVYLFQISDRVLTSRSIDTLVMLTGLIVAAVILQAIFDGIRRMILMRTAVEVAAQLGAPILSAAARASLHSNGREYQTLG DLQQLRSFLVSSTLLSFLDAPIAPFFVLAVFLIHPHLGSIVIASALLLLVVTLLNQRATAAPFGEASSFQSKANLHLDSM SRNSQIINALAMIPEAVRIWGKDMAGSLRAQVLAQDRNIALASLSKAVRLLTQVMMLGWGANLALHGELTGGMVIAASIV AGRALGPIEGAIEGWHQVVQSRAAYGRIASLLQNSPLNFERLKLPRPEGRLDVERLLFVPNGTKRVVLNGVTFALSPGDS LAVIGSSGAGKTTLGKMLVGSILPTSGNVRLDLMDLRNWDQRQFGESIGYLPQDVQLFPGTIKANIARMQDDATDADIYA AAKLADVHDMIALLPHGYETFVAADGSPLSGGQKQRVALARAFFGNPRMVVLDEPNSNLDSAGEAALTRALAHAKKQKIT VITITQRPALLNSVDKVLLLVNGTVALFGMRQDVLKALSSRGMNLEGNPLDHNQLT
Sequences:
NA
Specific function: NA
COG id: COG4618
COG function: function code R; ABC-type protease/lipase transport system, ATPase and permease components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA