| Definition | Sinorhizobium fredii NGR234 chromosome, complete genome. |
|---|---|
| Accession | NC_012587 |
| Length | 3,925,702 |
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Identifier: 227822766
GI number:
Start: 2301572
End: 2307700
Strand: Direct
Name: Not Available
Synonym: NGR_c22250
Alternate gene names: NA
Gene position: NA
Preceding gene: 227822765
Following gene: 227822769
Centisome position: NA
GC content: NA
Gene sequence:
>6129_bases ATGAAACCCTTTGAAACGCTGGCTGACATCAGACGTCGATCCGTAGACGCCGTCGTGGCGCAGCTCGGTACCAATAACGA GGCCCTGAACCAGCAACTGCGTTCCATGCTCGGTAGTGAGCGGACCGGAGACGGCTCACTCATTCAAGACCCCGTCATCG AAGGAGCGCACCCTTTCATCACAGCCGCCGAAAGCATGGCTGAAGTCCCGCCAGATGTGCTCCGCCCGCAACTCGTGTCG ATCCTGGACGGACTCGATGAGGAAGACGAATATCGGTTTCCAAAATCCAGAAAACCTTTCAGGCATCAGTTGCAAGCCTG GACCAAACTTGCCCAGCCCGGAACCCCGCAATCGGTGCTCGTTACGTCGGGGACTGGCTCAGGAAAAACGGAGTGCTTTC TTTTTCCGATCCTCAGTGATCTCATCAGGCAGACCGAGGGCAACTCGGCAACATTGGAGGGCGTCCAGGCGATCATGCTG TACCCGCTGAACGCCCTCATTGAAAGTCAGCGGGCGCGTTTGTCCGCGTGGACAAGTCCCCTAAAGGGCCGCGTCCGGTA TTGCCTCTACAACGGCGATCTCCCCCAGCCGGCTCTCCCAGAAAGCGAACGCAAGGCTTCGCCCGAACGCCAAATCGACA GACATCAGCTTCGCTCTTCACCAGCCCCAATATTGGTGACGAACATTACAATGCTCGAGTACATGCTGGCTCGAGCTGAA GACCAACCGATTATCGAGAAGTCAAATGGGAAACTGCGGTGGATCGTATTGGACGAGGCGCATTCGCTGGTCGGTGCTGC CGCTGCCGAAACAGCACTGCTCATCCGACGCGTCCTGCTCGCATTCAATACCGCCCCTGAGAACGTTCATTTCGTGGCTA CCTCGGCAACGATCGGCGATGACCGGGACACCGATGACAAGCTTCGACAGTTTCTGGCCGAGGTCGCGGGCATACCTGAC GACCAAGTGCATGTGATCAAGGGTGACCGCACCCTACCCCATCGTCCGAATGCCAAAGCCGACATGCAGATCGATCCATC GGCAGCGACTCCCGCCGAGCTCTACGACTATTTCGGAGGAAAGGAACAGGTCTGGGAATTTATCAAAACGCTCAAGGAAA AACCGCAACCGCTAACGGCGCTGGCAAAAGTCGCCAGGTCCGTCGGTATCGAAACCGAAGACTTCATGTCTCTGCTGGCC GCAGCTGAGAAATCGGACCCGGAGACCGGAGAACCGGAGCGCCTCGCGCCAATGAGGGTGCACAGTTTTGAGCGAGCAAT TCCCGGTATCTGGGGATGCGTCAATCCAGACTGCGTCGCTGCACCATCAGGATGGCCGTTTGGGAAGTTGTTTCCCAGCA AATTCGAGAACTGCGACACATGCGGCGCTCCGGTGGTCGAGCTGATCAGCTGTACGGAGTGCGGAGAGCCAATGCTGGAG GCGGAAGAAGACAGGTCGGATGGTAAATTGCGCCCGTCCCGTCGGGGATTGGAGCGAGACGAGTTCCAGTATGAGGCCGA ACGCGACGGAGAATTGGACGCCGAGGGCGACGAGGACGATGACGAAGAGGACGGCGACGCATCGCTTGCCCACAAATACA TGGCAAAGCAGACCATCCTGTTCGCCGCAACCCCTTCAAAATCCTCCCGTCTTATCTCCCTGTCGACCAAGGATTGGAGC GTGCTTGCTGGTCCGACTACCGACTCCGTCAACTTGAGGTACGAGGAAAAGTCGGTCGCAGAGGGCGTCTGCCCTTGCTG TGGCGTCAATGCGCTGCGCGGCATCGACAATCTGCTTCGACCGGTACGTTTCGGTGCGCCTTTCATGGTCACGGCGGCCG CACCAATACTGCTCGAAGCTGTCGATCCGAAGCCCAACAGCGAACGCACGTTACCATCCTCTGGTAGGGGCCTCATTTCG TTCACTGACAGCCGCCAGGGAACAGCCCGGATGTCGGCGAAGTTCCAAGCGGAGTCCGAGCGGAATTTCGTGCGATCATT CATCTACCATGCGGTGCAAGGTGCACTTGCGGCCGACGAGGACACTCCCGAGGTGGCAAACGTTCGCACCGTTATTGCGC AAATCGAGCCCCTGGTTGGCACGAACCCAGGACTACAGCTCGTATTGGATGGACAACGCGAACAATTGGCGAAGCTGACG AGCGAGAGCGTAATCGGCGTCAACTGGAACGCACTCATAGATCGCCTCGCGAGGCGACCGGAGGTTGAGTTCTGGATGAA GGAAGTCTGGGAACCTCGCGACCCGGATCGCTTCGGCGATGCGCACAAATTGGCGGAATTCCTGCTGTTGCGCGAGCTGT TCAGACGCCCGCGGCGCGCGAACTCGCTAGAGACCCTGGCACTGGCATGCCTAAAATTCCCGTCTGTGGAGCGCATTGCT TCCATGCCGCCGGCGTTCACACGCCGCGGGAAAACGATAAATGATTGGCGTTATTTCCTGACCGCCATCATCAATCACTT CATACGCGCGAAATCGGCGGTGGACGTAGATCGTCGCACGATGCGCTGGATCGCACCTCAGATTAAGTTGCGGCCGCTTC TGGGGCCGGGGCGCTCCAGCGGAGGCGACAAGCGTTATGTGATTTGGCCCAAGGTTCCTCGGAACCTGTCGAGCCTGTCC ACGCCTCAGACCCTCCTCATCATGGGGCTGAAGCTCGATATCGCCGACCCGAGCGATCGTGACGACATGCAGGATTGCCT TCAGATGGCGTGGGATCAGCTCCAACAGGTCTTGAACGCCGACCGTGACAATCCCGCGCTCGACTTCTCAAAGTCGGTCG TCGCGCCTGTGACCGACGGCTTCCGATGCCCGATCACTCGCAAGGCAATAGAGATCGCACCTTTCGGCCTCACTCCCTAC GTTCGCATCAATTCGGCGGTTTCGAATGCCACTCCGCTCAGGATGCCAGAGATTCCATTCCAGCTCATCGCGCCCGACGA TCCAGCATCGGCCAAATCAAAAATCTCGGACTGGCTGAACACCGACGGACGTGTCGCCGATCTCAAGAAGGCGGGCATTT GGATCAACATTTCCGAACGCATTGCGCTCTTCGTCGATTACGCCCGGTCTGCAGAACACTCCGCTCAACAGGAAAGCCAG CGTCTCCGGCAATACGAGACGGATTTCAAGGATGGCCGAATAAATATCCTAAACTGCTCTACGACGATGGAAATGGGCGT GGACATCGGCTCTGTTTCCACGGTGATGATGACAAACGTTCCGCCGTCTATCGCGAACTATCGCCAGAGAGTAGGTCGCG CAGGGCGGCGTAGGCAGCCGTTCTCCATGGCATTCACGTTCTGCCGGGACCGCCCGCTGGATCGCGAAGCCTTTGGAAAT CCCTTGGCATATCTCGATCGAGCAATGTCACCTCCCAAGGTCGCCTTGAACAGTCGGCCAATCGTCCAGCGACACGTCAA CGCATATCTTCTCCGCCAATACATGCTGGCCAGGGGCGGAGACACTCTCAAGCTGACAATCGGCTCGCTGATGGGATGCC CGATCAAACTGCTGGAAGGTCGGGTCGAAAATGCCCCTGTATCGCAATTCCTGCAATGGCTCGAAGACCCAAGCACCATC CGTGCGACGACCGCGGACTTGAAGACGCTAGTGGCTCGGTCCGTGCTGGAGCAGGACAGCACGCTGGTCGAGGATTGCCG GAAGGCAATGCAGGAGGTTGAGGAGGTTTTTGTCCACGAATGGGAAGGCCTTCGTCAACTTGCACGCGACGAAGGCGAGA ACATGAAAGAAGCAGGCCGAGCTCGCATGTCGCTCGAACTCCAGAGGCTTTGCGGCGAATTCCTCCTCAGCGCTCTCGCT GACAGAGGTTTCCTACCGGGACACGGATTCCCCACAAACGTTGTCACGTTCATCCCTCACAGGTCGAAGAAGCCAAAGCA AGATGAACCGTCGATGGACGGTCGCAGACACGCGAGGCTGTCCGGCCCCCAACGATCCCTAGACCTGGCGATCCGCGACT ATGCCCCCGGTTCGGAAGTCGTCCTCGACGGCCTCGTGCACCGCTCGGCCGGCGTTCTACTCAACTGGAAAAGACCTGCG ACCGAAGAAAAGGTCAGAGAGGTCCAAAGCATTCGCCGGCACTGGTGCTGCTCGCAATGCGGAGCTGCCGAGACCACTCT TCAGGATGTGCGTGTCTGCCGCGAATGTGGTGCGCAGGTACTCAGCGTCGAATACCTGCGGCCCAGCGGATTTGCTGTCG ACTTCTGGAAGAAGGAACATGCAGATACCGATCGGATCACATACGTTGCGCCGGAGGAACCCGTCGTATCGATCGCAGAG GAGCCGTGGATCGCGCTCCCTATCCCATCTTTGGGGCGCTTCCGCGGGAGCGGCGAAGGCACCGTGTACTACTCGAATGC CGGGCCGACCAGGAATGGTTACGCGGTCTGTTTGCACTGCGGTCGCGCCGAACCCGAGCTCGATCCCGCTGGTAATTCCG ACGAGGCCCGTTCGTTCTCGCCTCTGGATGGACACCGCCCGCTGAGACGGAAAGCAGCCGACGGCGACATCATCTGCGAA GGCGTCGAGAAGAAGTGGAAAATCAAACGGAATCTCGCCCTCGGTTACGAGATCACGACTGACGTCTTCGAGTTGCAACC TTCAACTCGAATTTCCAAAGCGGCGGCGACCGCATTGGTTATCGCCATGCGTGAAGCTCTTGCGCGCTCGCTAGGCGTAG AGGCAGACGAAATGGGTTATTCCGTTCATCGCTCCAAGAACGAACTTGGTGGTGACTGCAATTCTCTGCTCGTCTTTGAC AAGAACGCAGGCGGCGCTGGGTTCTCGATTGCGATGGGCTACAACATCGCGAAGGTACTCAAGGATGCGGAGGAAATCCT GGATTGCAGCAGTCCAGGGTGTGTTGACGGCTGCGCAGCCTGCGTTCTTACCTCGGACGCTCCGTTCGAGGACGGAGAAT TGGACAGGACTTCAGCCCTCGCCTTCGTTCGCGGCCATCTGAGCTTTGGTGCTGCGGTGGAAGTCAGAGACCGTTTCTCT GATGACACGGTTCTCTCGATCGCGATTACCGACGAAGTCGATCGCGAGCTTAAACGTCGCAATAATCCGCTTTTGAGAAT CTACATACCCGAGGATGCCGATCTCGGACAGATACCTTCGTGGTCGGTTATGCAAGACCTGAGCACCTGGTCATACCGTG GATATCGTCTCGCCGTCGTGGTGCCACCCAAGACAGTCGCACGATCAGATCAGGCATCGAAGCTCGTTCTTCAGACGCTG GGACACAGACTATCCGTGGACGACAGGTTCGCGATCCATATCGGCGAGGCACCGATATGCTCAAACGGCGCGAGTGTTCT AGCGACCGTAAGCGGGAATGGCCACACCATGGCTTGGGCGACACATAGCGCTTCATCTCGCTATCCTGGCATCGCCTGGG GACAGCCGGCAGAAGGCTCCATCTTCAGGGGGACCATCCAAGACACCGCGTCCACAAACCCGATTTCACCTTCGGAGCTT CTCCCGCAATCGACTGCGAAGGTGCTTCTTATCGAAAAGAATCTGGATCGTTCGATGAGCCTCTTCGGAACAGGCATGGC AGGGCTCATCCGAACCAATCTAGCGAACCTCGGATTTGAAGCGGACGCCGCGATATCACGAATTGAATATAAGGACCCGT ATGTGCGGTCGCCGTTGGTGTCAAAACTGCTTATCGACACGGCAGCGGCATTGTTCAAGTCCTCGACGTCGCCCGTCTTA AAAATCACGACCGCGCCGCCGAAAGCGCCGGTTTCGCCTCCAAAGCATATTTCGAACGACTGGCCCGACGGCCACTTGGT TTCCTCGGTGCAAGCAGAATATGGTCGTCTGAAGAACATTGACGTCCAGGTCAGCCTCGGCGACTGCGGCCATGGTCGAT TTATGGAGTTGTCGTTTACCGATGGGCGCGCGGCCACTGTGATTTTCGACCAGGGCTTCGGCGCTTGGACTCCAACAGTC CGGGACAGCCGCACATTGCATGACTTCACGCAGACGCCGTACGCACAAGCGTCGTCGATGCAGAAATCCAATCCAATGCT AGCGAGAAAGGGAGTGTGGCCGACATATGTCGTGCTAAGAGCTGGATAA
Upstream 100 bases:
>100_bases ACCCCGACCTCGAAGTTCCACTTCGGGCCGCGCTTCACGAGAACGGTGCTTTCGTCTCCGAAGCCTATCCCCATTTCTTC AATTTCTTCAGGACCAAACA
Downstream 100 bases:
>100_bases GCGCGTGGGTGTCCCTCTTGGTACTACCTTGGCGGACCGAAATCCGCCAAGGTAGTACCTCTTGATTTCACGCTGGGTCA GAACCTCCACCGACGGGCAT
Product: ATP-dependent helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2042_residues MKPFETLADIRRRSVDAVVAQLGTNNEALNQQLRSMLGSERTGDGSLIQDPVIEGAHPFITAAESMAEVPPDVLRPQLVS ILDGLDEEDEYRFPKSRKPFRHQLQAWTKLAQPGTPQSVLVTSGTGSGKTECFLFPILSDLIRQTEGNSATLEGVQAIML YPLNALIESQRARLSAWTSPLKGRVRYCLYNGDLPQPALPESERKASPERQIDRHQLRSSPAPILVTNITMLEYMLARAE DQPIIEKSNGKLRWIVLDEAHSLVGAAAAETALLIRRVLLAFNTAPENVHFVATSATIGDDRDTDDKLRQFLAEVAGIPD DQVHVIKGDRTLPHRPNAKADMQIDPSAATPAELYDYFGGKEQVWEFIKTLKEKPQPLTALAKVARSVGIETEDFMSLLA AAEKSDPETGEPERLAPMRVHSFERAIPGIWGCVNPDCVAAPSGWPFGKLFPSKFENCDTCGAPVVELISCTECGEPMLE AEEDRSDGKLRPSRRGLERDEFQYEAERDGELDAEGDEDDDEEDGDASLAHKYMAKQTILFAATPSKSSRLISLSTKDWS VLAGPTTDSVNLRYEEKSVAEGVCPCCGVNALRGIDNLLRPVRFGAPFMVTAAAPILLEAVDPKPNSERTLPSSGRGLIS FTDSRQGTARMSAKFQAESERNFVRSFIYHAVQGALAADEDTPEVANVRTVIAQIEPLVGTNPGLQLVLDGQREQLAKLT SESVIGVNWNALIDRLARRPEVEFWMKEVWEPRDPDRFGDAHKLAEFLLLRELFRRPRRANSLETLALACLKFPSVERIA SMPPAFTRRGKTINDWRYFLTAIINHFIRAKSAVDVDRRTMRWIAPQIKLRPLLGPGRSSGGDKRYVIWPKVPRNLSSLS TPQTLLIMGLKLDIADPSDRDDMQDCLQMAWDQLQQVLNADRDNPALDFSKSVVAPVTDGFRCPITRKAIEIAPFGLTPY VRINSAVSNATPLRMPEIPFQLIAPDDPASAKSKISDWLNTDGRVADLKKAGIWINISERIALFVDYARSAEHSAQQESQ RLRQYETDFKDGRINILNCSTTMEMGVDIGSVSTVMMTNVPPSIANYRQRVGRAGRRRQPFSMAFTFCRDRPLDREAFGN PLAYLDRAMSPPKVALNSRPIVQRHVNAYLLRQYMLARGGDTLKLTIGSLMGCPIKLLEGRVENAPVSQFLQWLEDPSTI RATTADLKTLVARSVLEQDSTLVEDCRKAMQEVEEVFVHEWEGLRQLARDEGENMKEAGRARMSLELQRLCGEFLLSALA DRGFLPGHGFPTNVVTFIPHRSKKPKQDEPSMDGRRHARLSGPQRSLDLAIRDYAPGSEVVLDGLVHRSAGVLLNWKRPA TEEKVREVQSIRRHWCCSQCGAAETTLQDVRVCRECGAQVLSVEYLRPSGFAVDFWKKEHADTDRITYVAPEEPVVSIAE EPWIALPIPSLGRFRGSGEGTVYYSNAGPTRNGYAVCLHCGRAEPELDPAGNSDEARSFSPLDGHRPLRRKAADGDIICE GVEKKWKIKRNLALGYEITTDVFELQPSTRISKAAATALVIAMREALARSLGVEADEMGYSVHRSKNELGGDCNSLLVFD KNAGGAGFSIAMGYNIAKVLKDAEEILDCSSPGCVDGCAACVLTSDAPFEDGELDRTSALAFVRGHLSFGAAVEVRDRFS DDTVLSIAITDEVDRELKRRNNPLLRIYIPEDADLGQIPSWSVMQDLSTWSYRGYRLAVVVPPKTVARSDQASKLVLQTL GHRLSVDDRFAIHIGEAPICSNGASVLATVSGNGHTMAWATHSASSRYPGIAWGQPAEGSIFRGTIQDTASTNPISPSEL LPQSTAKVLLIEKNLDRSMSLFGTGMAGLIRTNLANLGFEADAAISRIEYKDPYVRSPLVSKLLIDTAAALFKSSTSPVL KITTAPPKAPVSPPKHISNDWPDGHLVSSVQAEYGRLKNIDVQVSLGDCGHGRFMELSFTDGRAATVIFDQGFGAWTPTV RDSRTLHDFTQTPYAQASSMQKSNPMLARKGVWPTYVVLRAG
Sequences:
NA
Specific function: NA
COG id: COG1205
COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA