| Definition | Sinorhizobium fredii NGR234 chromosome, complete genome. |
|---|---|
| Accession | NC_012587 |
| Length | 3,925,702 |
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The map label for this gene is topA
Identifier: 227821655
GI number:
Start: 1150828
End: 1153500
Strand: Reverse
Name: topA
Synonym: NGR_c10860
Alternate gene names: NA
Gene position: NA
Preceding gene: 227821656
Following gene: 227821654
Centisome position: NA
GC content: NA
Gene sequence:
>2673_bases ATGAATGTTGTAGTGGTGGAATCGCCTTCCAAGGCCAAGACGATCAACAAGTATCTGGGCCCCGGCTACAAGGTGCTTGC TTCGTTCGGCCATGTGCGGGATCTGCCGGCCAAGGACGGATCGGTTCGCCCGGACGAAGACTTCGAAATGTCGTGGGAAG TCGACGGCGCCTCCGCCAAGCGGATGAAGGACATTGCCGACGCCGTGAAGTCGTCGGACGGACTGATCCTGGCAACCGAC CCGGACCGGGAAGGTGAAGCGATCTCCTGGCATGTGCTCGACCTCCTCAAGAAAAAGAAGGTCATCGGCGACAAGCCGGT CAAGCGCGTCGTCTTCAATGCGATCACCAAGAAGGCCGTGCTCGATGCGATGGCCGATCCGCGCGACATCGACATTTCGC TCGTCGACGCCTATCTCGCCCGCCGCGCGCTCGACTACCTCGTCGGCTTCAACCTTTCGCCGGTTCTGTGGCGCAAGCTG CCTGGCGCCCGTTCGGCCGGTCGCGTCCAATCGGTGGCGCTGCGGCTCGTCTGCGATCGCGAGGCCGAGATCGAACGCTT CGTCACGGAAGAATACTGGAATATCTCGGCGCTCCTGAAGACACCGCGCGGCGACGAGTTCGAAGCGCGGCTCGTCTCGG CCGACGGCAAGCGGCTGCAGCCGAAAGCGGTTGGCAACGGCGAGGAGGCCAATCGGCTGAAGGCCCTGCTCGACGGCGCG AGCTATGTGGTCGAAAGCGTCGAGGCGAAGCCCGTCAAGCGAAACCCGGGTCCGCCCTTCACAACCTCGACGCTGCAGCA GGCCGCCTCCTCCAAGCTCGGTTTCTCGGCGTCGCGCACCATGCAGGTGGCACAGAAGCTCTACGAGGGCGTCGATGTCG GCGGCGAGACCGTCGGTCTGATCACTTATATGCGTACGGACGGCGTACAGATGGCGCCGGAAGCGATCGATGCGGCGCGC CGGGCGATCGGCAGCCAGTTCGGCACCCGCTACCTGCCGGAAAAGCCGCGCTTCTATTCGACCAAGGCGAAGAACGCCCA GGAAGCCCACGAAGCGATCCGCCCGACGGACTTCAACCGCACCCCCGATGAGGTGCGCCGCTTCCTCGACGGCGACATGC TGAAGCTCTACGACCTGATCTGGAAGCGCGGCATCGCCAGCCAGATGGCATCGGCCGAGATCGAGCGGACGACGGCGGAG ATCGCCGCCGACAACGGCGGCAAGAAGGCCGGCCTGCGCGCCACCGGCTCCGTCATCCGCTTCGACGGCTTCATCGCCGC CTATACCGACATGAAGGAAGACGGCGAGCAGGCGGACGACGGCGATGAGAGCGGCCGGCTGCCCGAGATCAATGCGCGCG AAAATCTCGCCAAGCAGAAGATCAACGCCACCCAGCACTTCACCGAGCCGCCGCCGCGCTATTCGGAAGCGACGCTGATC AAGAAGATGGAAGAGCTCGGCATCGGGCGCCCCTCGACCTATGCCGCGACGATCAGCACGCTCGTCGACCGCGACTATGT GGAGATCGACAAGCGCAAGTTGATGCCGCAGGCCAAGGGCCGGCTGGTGACGGCGTTCCTCGAGAGCTTCTTCACCCGCT ATGTCGAATACGATTTCACCGCATCTCTCGAGGAAAAGCTCGACCAGATCTCGGCCGGCGAGCTCAATTGGAAGGACGTC CTGCGCGAGTTCTGGAAGGATTTCTTCTCGCAGATCGAGGACACCAAGGAACTGCGCGTCACCAATGTGCTCGATGCGCT CAACGAGGAGCTTGCACCGCTCGTCTTCCCGAAACGCGAGGACGGCGGCGACCCGCGCACCTGCCAGGTCTGCGGCACCG GCAAGCTCTCGCTGAAGCTGGGCAAATACGGCGCCTTCGTCGGCTGCTCGAACTATCCGGAATGCAACTACACGCGCCAG CTGTCGTCCGACAGCAACGGCGATGCGGAAGCGGCCGTGTCGAACGAGCCGCAGAGCCTCGGCAAGGATCCGCACACCGG CGAGGAAATCACCCTGCGCAGCGGTCGCTTCGGTCCCTATGTCCAGCGGGGCGACGGCAAGGACGCCAAGCGCGCGAGCC TGCCGAAGGGCTGGACGCCGGCGACGATCGACCACGAGAAGGCGCTCGCTCTTCTCTCGCTGCCGCGCGACATCGGCAAG CACCCGGAAACCGGCAAGATGATCTCGACCGGGATTGGCCGCTACGGACCGTTCGTGCTGCATGACGGCACCTATGCCAA TCTGGAATCGGTGGAGGACGTCTTTTCGATCGGCCTCAATCGCGCCGTTTCGGCTCTTGCCGACAAGCAGTCGAAGGGTG CAGGCGGCGGGCGCACCGCGGCTGCCGCCCTCAAGGAACTCGGGGAACATCCCGACGGCGGCGTGATGACTGTGCGCGAC GGGCGCTTCGGCCCCTATGTCAACTGGGGCAAGGTGAACGCCACCCTGCCGAAGGGCAAGGATCCGCAGTCCGTGACCGT CGAAGAGGCGCTGGCACTGATCGCCGAACGTGCGGCGAAAGGTGGCGTGTCGAAGGGCAAGGCGGGCAATGGCAAGGCGG CCAGGGGCAGATCCTCGACCGCGGCAACCAAGAGCACGGCGGCGAAAGCCGAGAAGCCCAAGGCGGCCGCAAAGGCGAAG AGCAAGACGGCCGCGAAGGCCAAGAAGGGCTGA
Upstream 100 bases:
>100_bases AACCCCTTGACCGCGCCCGAATCCCTGTCCATTTCGTGGCCACAACAAAGGCCGCGCAACGCCTGCGCCTTGCCAGAAGA GATTGTCTCAGAGAATGACG
Downstream 100 bases:
>100_bases CGTTGAGTAGAATTCCGCGCGATCCGACCGAACGGCGCACAAAAAGTGCCGGCAAGAAGCAGTTGCGCGCAGCCCAGGCG GCGCCCGCAGTCAAGGACGC
Product: DNA topoisomerase I
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>890_residues MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAKRMKDIADAVKSSDGLILATD PDREGEAISWHVLDLLKKKKVIGDKPVKRVVFNAITKKAVLDAMADPRDIDISLVDAYLARRALDYLVGFNLSPVLWRKL PGARSAGRVQSVALRLVCDREAEIERFVTEEYWNISALLKTPRGDEFEARLVSADGKRLQPKAVGNGEEANRLKALLDGA SYVVESVEAKPVKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDVGGETVGLITYMRTDGVQMAPEAIDAAR RAIGSQFGTRYLPEKPRFYSTKAKNAQEAHEAIRPTDFNRTPDEVRRFLDGDMLKLYDLIWKRGIASQMASAEIERTTAE IAADNGGKKAGLRATGSVIRFDGFIAAYTDMKEDGEQADDGDESGRLPEINARENLAKQKINATQHFTEPPPRYSEATLI KKMEELGIGRPSTYAATISTLVDRDYVEIDKRKLMPQAKGRLVTAFLESFFTRYVEYDFTASLEEKLDQISAGELNWKDV LREFWKDFFSQIEDTKELRVTNVLDALNEELAPLVFPKREDGGDPRTCQVCGTGKLSLKLGKYGAFVGCSNYPECNYTRQ LSSDSNGDAEAAVSNEPQSLGKDPHTGEEITLRSGRFGPYVQRGDGKDAKRASLPKGWTPATIDHEKALALLSLPRDIGK HPETGKMISTGIGRYGPFVLHDGTYANLESVEDVFSIGLNRAVSALADKQSKGAGGGRTAAAALKELGEHPDGGVMTVRD GRFGPYVNWGKVNATLPKGKDPQSVTVEEALALIAERAAKGGVSKGKAGNGKAARGRSSTAATKSTAAKAEKPKAAAKAK SKTAAKAKKG
Sequences:
NA
Specific function: NA
COG id: COG0550
COG function: function code L; Topoisomerase IA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA