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The map label for this gene is yybT [H]

Identifier: 227818239

GI number: 227818239

Start: 5213219

End: 5214991

Strand: Reverse

Name: yybT [H]

Synonym: BAMEG_5771

Alternate gene names: 227818239

Gene position: 5214991-5213219 (Counterclockwise)

Preceding gene: 227818240

Following gene: 227818238

Centisome position: 99.71

GC content: 36.44

Gene sequence:

>1773_bases
ATGATTACAAGGGTAAAGAAAGTGAGTAATGAAGCATTTAACCAGATGCCGATTGGTATTTTGTTATACAATAAGGATTA
TGGGATTGATTGGGCAAATCCTTATTTATCTTCATGTCTGGGACAGCATGCATTAGCTGGATGGCACCTTTATGATGTAT
CAGAAACGTTACTTCTTTTTATTAAGGGAGAAACTTCCGATGATATAGTTTCTTTAAATAATCGAAAGTTCCGTGTCTTT
GTAAGGAAAGAAGAAAAGTTAATTTATTTCTTTGATGTAACAGAACAAACAGAAATCGAAAAAATGTACGAAGATCAACG
TACTGTTTTAGCTGTAATTTATTTAGATAATTATGATGAAGTTACACAAGGATTAGATGATCAATTACGTACGAATATAA
CAAGTCTTGTGACATCGCGTCTAAATGAATGGGCCGTTAAGTATGGGGCGTATTTAAAACGTGCATCTTCGGAAAGATTC
TTCGTTGTACTAAATGAAAGTATTTTAGCACAGATGGAGAAAGGGAAATTTAGTATTTTAGATCAAGTACGTGAAGAAAC
ATCCAAAAGGAATATACCACTTACATTAAGTGTAGGTGTTGGATCAGGTGATTTACCTTTATCTGAGCTTGGAGCTATGG
CTCAATCAGGTTTAGACCTTGCGCTTGGACGTGGTGGAGATCAAGTAGCTATTAAACAAGCGACAGGTAAAGTTAAGTTT
TATGGTGGTAAGACAAATCCAGTGGAAAAACGTACTCGTGTACGTGCCAGAGTGATTTCTCATGCATTAAAGGATTTAGT
ACTAGAAAGTAGCAATGTCATTATAATGGGGCATAGGGCTCCTGATATGGACGCAATTGGTGCTGCGATTGGTATTTTAA
AAGTGGCGCAATTAAATGAACGAAAAGGATATATTGTGCTCGATGAAAATGATTCTGATAAGGGAATTAAACGTTTAATG
GATAAAGTGAAACAAAATGAAGAGTTATGGTCTCACTTTATTACACCAGAACAAGCGATGGAATTTGCAAATGATGATTC
ATTACTTGTTGTTGTTGATACGCATAAGCCTTCAATGGTGATGGAAGAAAAACTGTTACGCAAAATTGAAAATGTAGTTG
TTATTGACCATCATCGCCGAGGAGAAGATTTTATTGAAGATCCATTGCTTGTTTACATGGAGCCATACGCTTCTTCCACG
GCGGAACTTGTTACGGAATTACTTGAATACCAACCGAAAAATTTAAAAATGACAATGTTAGAAGCGACAGCATTATTAGC
AGGTATTATTGTTGATACGAAAAGCTTTACATTCCGGACAGGTGCTCGTACGTTTGATGCTGCTTCTTATTTACGCTCAC
ACGGTGCAGATACTGTACTTGTACAAGAGCTTTTAAAAGAAGATATGGATCAGTATTTACGGGTTGCAAAAGCCATTAAA
AATGCGTACATTTATACAAATGGAATTGCGATTGCAAAAGTTGATAGCGATGATTACTACGATCAAGTGCTTATTGCGCA
ATCAGCGGACACATTATTAACAATGACAGGAATTATTGCATCATTTGTTATTGCAAAACGTGGCGAGAATTTCATTGGAA
TTAGCGGCAGGTCTTTAGGTGAAGTGAATGTGCAGCTAATTATGGAAAATTTAGGTGGTGGTGGGCATTTAACAAATGCA
GCCACACAAATGAAAAATGTTACAGTAGATGAAGCTGAGGAGAAGCTTCGATTTGTTATTGATGACTATTTACAGGGAGG
CACACAATCATGA

Upstream 100 bases:

>100_bases
TGATGGGGATAATCTCCTTTTTATTTTTTGTATCGTCCTTTTTGTTGTTGTACGATTTGAACTTACTTTCCAAAAGAATT
TTGAAAAACATACGACAGAT

Downstream 100 bases:

>100_bases
AAGTAATTTTTCTAAAAGACGTAAAAGGTAAAGGGAAAAAAGGAGAAGTAAAAAACGTACCAGATGGTTATGCAAATAAC
TTCTTGCTAAAACAAGGATT

Product: DHH subfamily 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVF
VRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERF
FVVLNESILAQMEKGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKF
YGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLM
DKVKQNEELWSHFITPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASST
AELVTELLEYQPKNLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIK
NAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNA
ATQMKNVTVDEAEEKLRFVIDDYLQGGTQS

Sequences:

>Translated_590_residues
MITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVF
VRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERF
FVVLNESILAQMEKGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKF
YGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLM
DKVKQNEELWSHFITPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASST
AELVTELLEYQPKNLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIK
NAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNA
ATQMKNVTVDEAEEKLRFVIDDYLQGGTQS
>Mature_590_residues
MITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLFIKGETSDDIVSLNNRKFRVF
VRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERF
FVVLNESILAQMEKGKFSILDQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKF
YGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNERKGYIVLDENDSDKGIKRLM
DKVKQNEELWSHFITPEQAMEFANDDSLLVVVDTHKPSMVMEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASST
AELVTELLEYQPKNLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIK
NAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNA
ATQMKNVTVDEAEEKLRFVIDDYLQGGTQS

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 66060; Mature: 66060

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLF
CCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCEEEEE
IKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVIYLDNYDE
EECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCHHH
VTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQMEKGKFSIL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCHHHH
DQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKF
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCEEEE
YGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNE
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
RKGYIVLDENDSDKGIKRLMDKVKQNEELWSHFITPEQAMEFANDDSLLVVVDTHKPSMV
CCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCHH
MEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPKNLKMTML
HHHHHHHHHCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEHH
EATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIK
HHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLG
CCEEEECCEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
EVNVQLIMENLGGGGHLTNAATQMKNVTVDEAEEKLRFVIDDYLQGGTQS
CHHHEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITRVKKVSNEAFNQMPIGILLYNKDYGIDWANPYLSSCLGQHALAGWHLYDVSETLLLF
CCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCEEEEE
IKGETSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAVIYLDNYDE
EECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCHHH
VTQGLDDQLRTNITSLVTSRLNEWAVKYGAYLKRASSERFFVVLNESILAQMEKGKFSIL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCHHHH
DQVREETSKRNIPLTLSVGVGSGDLPLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKF
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCEEEE
YGGKTNPVEKRTRVRARVISHALKDLVLESSNVIIMGHRAPDMDAIGAAIGILKVAQLNE
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
RKGYIVLDENDSDKGIKRLMDKVKQNEELWSHFITPEQAMEFANDDSLLVVVDTHKPSMV
CCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCHH
MEEKLLRKIENVVVIDHHRRGEDFIEDPLLVYMEPYASSTAELVTELLEYQPKNLKMTML
HHHHHHHHHCCEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEHH
EATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMDQYLRVAKAIK
HHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NAYIYTNGIAIAKVDSDDYYDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLG
CCEEEECCEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
EVNVQLIMENLGGGGHLTNAATQMKNVTVDEAEEKLRFVIDDYLQGGTQS
CHHHEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]