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The map label for this gene is ypmR [H]

Identifier: 227818169

GI number: 227818169

Start: 5136624

End: 5137433

Strand: Reverse

Name: ypmR [H]

Synonym: BAMEG_5695

Alternate gene names: 227818169

Gene position: 5137433-5136624 (Counterclockwise)

Preceding gene: 227818170

Following gene: 227818168

Centisome position: 98.23

GC content: 32.72

Gene sequence:

>810_bases
ATGAGATCAAAAGTGGTAAAAGTAATTCTACTCATTACAATTGCATCTTTCTGTTTATTTGCATATGGCTTTGTTTCAGG
TGTAAATGATGTATTAAATCCGAGAGCTTCAAATTTAATTAAAAAAACCGATGTAGTAGCAAAAGAGAAAAAGAAAACAG
GAACGTTACAAATCGTTAGTTTAGGTGATTCATTAACACGCGGTGTTGGTGATAAAGAAGGAATTGGCTATATTGGACGA
ATGAAAGAAGATTTACAAAAAGATTATAAGCAAAAGGTTGCTTTAACGAACTTAGCTGTTAGTGGTGCGAAAATGCCTGA
CTTATTAAAACAAATTGAGAGTAATGGCGCTCAATATTCAATTAAACAAGCAGATGTAATCGTTTTAACGATTGGAGGAA
ATGATTTATTTCCGGGCTGGGAATCGCTTGGAAAGATAGATTTAGAAACATATCGTCCGGATACGGAAACATTCCAGAAT
GAAGCGAAGAAAATTATAGAAGAAATTCGTAAATTAAATACAGATAGCCCTATTTTTTGGCTAGGTTTATATAATCCTTT
TGAAGATGTAGAAGATTTAAAGGGGTCTTCAAACATTGTTGTAGACTGGAATGCATCTTTAGAAAAGTTAGCGATAAATA
ATAAAAATGTGTATATTACACCGACATTTGATTTATTCCAAAATCGTGGGAAAGATTTATTATACTCCGATCATTTCCAT
CCGAATGAAGTAGGGTATACATATATGGCGGACCGATTAGTTCAAAATGTTGTAAGTAAATTAAAACTAGAACAAGGAGG
GGTAAAATGA

Upstream 100 bases:

>100_bases
AAAAGGGAAACGACATAATAGATAAGGTGTGAAAATCGCTTTTCAAAATTGCGTTTGGTATAATTATGGACAATCTATGA
GGGCTAAAAGGGGTTTTGAT

Downstream 100 bases:

>100_bases
CAACGATACTTTCCGTACGAGACGTGAAGAAGGTAATTGGAAAGAAGACAATTGTAGAGAATATTTCCTTCGATGTAAAA
CAAGGAGAAGTGTTCGGCTT

Product: putative lipase/acylhydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR
MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN
EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH
PNEVGYTYMADRLVQNVVSKLKLEQGGVK

Sequences:

>Translated_269_residues
MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR
MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN
EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH
PNEVGYTYMADRLVQNVVSKLKLEQGGVK
>Mature_269_residues
MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR
MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN
EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH
PNEVGYTYMADRLVQNVVSKLKLEQGGVK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 30057; Mature: 30057

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
LGDSLTRGVGDKEGIGYIGRMKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYS
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
IKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQNEAKKIIEEIRKLNTDSPIFW
EECCCEEEEEECCCCCCCCHHHHCCEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
LGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH
EECCCCHHHHHHCCCCCCEEEEECCCEEHEEECCCEEEEEECHHHHHCCCCCCEEECCCC
PNEVGYTYMADRLVQNVVSKLKLEQGGVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
LGDSLTRGVGDKEGIGYIGRMKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYS
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE
IKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQNEAKKIIEEIRKLNTDSPIFW
EECCCEEEEEECCCCCCCCHHHHCCEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
LGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH
EECCCCHHHHHHCCCCCCEEEEECCCEEHEEECCCEEEEEECHHHHHCCCCCCEEECCCC
PNEVGYTYMADRLVQNVVSKLKLEQGGVK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]