Click here to switch to the map view.

The map label for this gene is ywiB [H]

Identifier: 227818130

GI number: 227818130

Start: 5104069

End: 5104506

Strand: Reverse

Name: ywiB [H]

Synonym: BAMEG_5656

Alternate gene names: 227818130

Gene position: 5104506-5104069 (Counterclockwise)

Preceding gene: 227818132

Following gene: 227818129

Centisome position: 97.6

GC content: 39.73

Gene sequence:

>438_bases
GTGGAGAAACAACTTGCAGGCTTGCCGGTACACGTTCATTTCGTAACAGAAATCCGTGAAGGGGCGAGGAAGGAAACCGT
TGCTTTTGAAGCAAATGGTCAATACTATGTAAAAGGTCAAGGTACATATGTAACATTCCAAGAGCCGAACGAACAAGGCG
AAGTGAAAACAATTATTAAAATTCAAGATGAACAAGTTCTTATTATGCGTTCAGGTGCTGTTTCGATGCGTCAGACGCAT
GTGAAAGGTGAATGGACAACTGGTACGTATACGAGTGAACTTGGTACGTTTGCATTGCAAACGAAAACTGATAACGTTCT
TTTTAAATGGTCGGATGAAAAGAAAAAAGGACAACTCTTCTTAACGTACGCATTGCTTCTAAGTGAACAAGAAGCTGGCA
GATATACAATTACGATTAATTTGAAGGAGGCAAAATAA

Upstream 100 bases:

>100_bases
TTTTTCAGCAGACAGACAGAGGTTTTTTTTGATATGATAGGAAAAGTGATTTATTATAAGTAGTATTTAATATCTATAAC
ATTTGAAAGGTGTGCAAGAC

Downstream 100 bases:

>100_bases
TGAATTCTTTAGAACAAGTAAAAGGATTAATTAAAGAAGAAATTCAAGCTGCTGTATTAAAGGCAGAATTAGCGACAGAA
GAACAGATTCCAAACGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEKQLAGLPVHVHFVTEIREGARKETVAFEANGQYYVKGQGTYVTFQEPNEQGEVKTIIKIQDEQVLIMRSGAVSMRQTH
VKGEWTTGTYTSELGTFALQTKTDNVLFKWSDEKKKGQLFLTYALLLSEQEAGRYTITINLKEAK

Sequences:

>Translated_145_residues
MEKQLAGLPVHVHFVTEIREGARKETVAFEANGQYYVKGQGTYVTFQEPNEQGEVKTIIKIQDEQVLIMRSGAVSMRQTH
VKGEWTTGTYTSELGTFALQTKTDNVLFKWSDEKKKGQLFLTYALLLSEQEAGRYTITINLKEAK
>Mature_145_residues
MEKQLAGLPVHVHFVTEIREGARKETVAFEANGQYYVKGQGTYVTFQEPNEQGEVKTIIKIQDEQVLIMRSGAVSMRQTH
VKGEWTTGTYTSELGTFALQTKTDNVLFKWSDEKKKGQLFLTYALLLSEQEAGRYTITINLKEAK

Specific function: Unknown

COG id: COG4506

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011038
- InterPro:   IPR015231 [H]

Pfam domain/function: PF09148 DUF1934 [H]

EC number: NA

Molecular weight: Translated: 16465; Mature: 16465

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQLAGLPVHVHFVTEIREGARKETVAFEANGQYYVKGQGTYVTFQEPNEQGEVKTIIK
CCCCCCCCEEEEEEEEHHHCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCEEEEEE
IQDEQVLIMRSGAVSMRQTHVKGEWTTGTYTSELGTFALQTKTDNVLFKWSDEKKKGQLF
ECCCEEEEEECCCCEEEEEEECCEEECCEECCCCCEEEEEECCCCEEEEECCCCCCCCEE
LTYALLLSEQEAGRYTITINLKEAK
EEEEEEEECCCCCEEEEEEEEEECC
>Mature Secondary Structure
MEKQLAGLPVHVHFVTEIREGARKETVAFEANGQYYVKGQGTYVTFQEPNEQGEVKTIIK
CCCCCCCCEEEEEEEEHHHCCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCEEEEEE
IQDEQVLIMRSGAVSMRQTHVKGEWTTGTYTSELGTFALQTKTDNVLFKWSDEKKKGQLF
ECCCEEEEEECCCCEEEEEEECCEEECCEECCCCCEEEEEECCCCEEEEECCCCCCCCEE
LTYALLLSEQEAGRYTITINLKEAK
EEEEEEEECCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]