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The map label for this gene is 227818013

Identifier: 227818013

GI number: 227818013

Start: 4983412

End: 4983882

Strand: Reverse

Name: 227818013

Synonym: BAMEG_5539

Alternate gene names: NA

Gene position: 4983882-4983412 (Counterclockwise)

Preceding gene: 227818014

Following gene: 227818011

Centisome position: 95.29

GC content: 35.88

Gene sequence:

>471_bases
GTGAAACCAGCGACTTTTAAAGAGGCAGTTGTGTTGTATGAAGGATTAATTGTGAATCAAATAAAGAAGTTAGGGATTTA
TCAAGATTATGAAGAGTATTATCAATGTGGGTTAATTGGTCTTTGGCATGCGTATGAAAGATATGATGCGAAGAAGGGAA
GTTTTCCCGCATATGCAGTTATAACTGTACGTGGTTATATATTAGAAAGATTGAAGAAAGAGTTTGCAGTGCAAGAAAAG
TGTGTATGTGTAGGAGAGTATGAGGCTCACTTTCATTTTGAAGATATTGAAATGAAAGCGAAGGATTTTATGAGTGTATT
AGATGAGAAGGAGAAGTATATTATTTTTGAACGTTTTTTTGTAGGAAAGACGATGGGGGAAATCGCTTTAGAGACAGAGA
TGACCTATTATCAAGTGAGGTGGATATATCGGCAGGCGCTTGAGAAAATGCGAAATAGCTTAAGAGGATAA

Upstream 100 bases:

>100_bases
AGTATTTAAAATTACCCACAGTGAAATCCTTTCTTTATTTTTATATTGTGAAGGTACCGCGGAATATTAGAAAGGTATAC
CTTTTAGAAACGGGTACTGT

Downstream 100 bases:

>100_bases
ATAGTATCATAAGAATGGAAGGCAAGGGATATTGCTTTCCATTCTACTTATTTTGTTAAGGTAGTAAATGTAATAAGAGG
TTTTTAAACTGTAGTGAATC

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: Sigma Factor; RNA Polymerase Sigma-70factor

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKPATFKEAVVLYEGLIVNQIKKLGIYQDYEEYYQCGLIGLWHAYERYDAKKGSFPAYAVITVRGYILERLKKEFAVQEK
CVCVGEYEAHFHFEDIEMKAKDFMSVLDEKEKYIIFERFFVGKTMGEIALETEMTYYQVRWIYRQALEKMRNSLRG

Sequences:

>Translated_156_residues
MKPATFKEAVVLYEGLIVNQIKKLGIYQDYEEYYQCGLIGLWHAYERYDAKKGSFPAYAVITVRGYILERLKKEFAVQEK
CVCVGEYEAHFHFEDIEMKAKDFMSVLDEKEKYIIFERFFVGKTMGEIALETEMTYYQVRWIYRQALEKMRNSLRG
>Mature_156_residues
MKPATFKEAVVLYEGLIVNQIKKLGIYQDYEEYYQCGLIGLWHAYERYDAKKGSFPAYAVITVRGYILERLKKEFAVQEK
CVCVGEYEAHFHFEDIEMKAKDFMSVLDEKEKYIIFERFFVGKTMGEIALETEMTYYQVRWIYRQALEKMRNSLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18599; Mature: 18599

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPATFKEAVVLYEGLIVNQIKKLGIYQDYEEYYQCGLIGLWHAYERYDAKKGSFPAYAV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEH
ITVRGYILERLKKEFAVQEKCVCVGEYEAHFHFEDIEMKAKDFMSVLDEKEKYIIFERFF
HHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCEEHHHHHH
VGKTMGEIALETEMTYYQVRWIYRQALEKMRNSLRG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPATFKEAVVLYEGLIVNQIKKLGIYQDYEEYYQCGLIGLWHAYERYDAKKGSFPAYAV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEH
ITVRGYILERLKKEFAVQEKCVCVGEYEAHFHFEDIEMKAKDFMSVLDEKEKYIIFERFF
HHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCEEHHHHHH
VGKTMGEIALETEMTYYQVRWIYRQALEKMRNSLRG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA