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The map label for this gene is mta [H]

Identifier: 227817929

GI number: 227817929

Start: 4894394

End: 4895155

Strand: Reverse

Name: mta [H]

Synonym: BAMEG_5453

Alternate gene names: 227817929

Gene position: 4895155-4894394 (Counterclockwise)

Preceding gene: 227817930

Following gene: 227817928

Centisome position: 93.6

GC content: 33.99

Gene sequence:

>762_bases
ATGGTAGTGATTTCAATACAACAATTGACGAGAGAAACAGGGGTTACGGTACGTACATTACGTTATTATGATCAAATAGA
TTTATTGAAGCCGAGTGGTAAAACAGAGGGTGGACATCGGTTATATAGTGAAGCTGACGTTATTCGTTTGCAACAAATTT
TGTTTTTAAAGGAAATGGGATTTTCATTAAAAGAAACTGCGAATATGTTAGTAAAAGGTGAGCTCGATTTAAAAAATTCG
CTTGAAAAACAACTTCGGTTTGTACAGGAAGAACAAAAGAAATTTAATCGAATGGAGAGTGTTTTACAAGCAGTTGTTTA
TTCGGTAGATGTGGAAGGAGAACTCGATTGGAAAGTTATGTTTGAACTGATTCAGCTTTCGAAGCAGTCTTCTCGTATAC
GTGAAATATTTCAAAATGAAGTGTTTTCAAAGGAAGAACAAAAATTGCTTCATAATTTACCAAACATGAGTAAGGAAGAC
CTGAATGTTTTAGAATGGGTAGATTTATTAAAGCAATTTCGTACTTTTATGAAAGATGGTAAAGAAGTAGCTAGTGATGA
GGTACAAGGGGCAACGAAGAAATTAATGCAGAAATGTTTAGAAATGGCTAATGGTGATGAAGCGTTTTTAGATAAGTTAT
GGGAAGTTAGAAAATCGAAGGAAGATTCACAGAAAATGAGCCTGTATCCGATTGAAGAAGAACTTTTACTATATATGGAT
GAAGCTTTTCGTGTTTATGATGAAAAGGAGAGGGATAAATGA

Upstream 100 bases:

>100_bases
AAAGCTGTTTATACAAAGAGTATAAACAGCTTTTTGTATTTTTTTACAAAAGGCTCGAAAGTTACGTAACGTCATCTTTT
ATAATGAAGGGGAAGAGGTG

Downstream 100 bases:

>100_bases
GTATGCTCGCAGAATATCGTTGGTATTTTTTAATTGGGGCAGAAATTGTATTTTGGTTATCGGCTATCGGTTTCTTTTTA
CTCCGTTACGGATTTCGTTT

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: Multidrug transporter activation protein [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVVISIQQLTRETGVTVRTLRYYDQIDLLKPSGKTEGGHRLYSEADVIRLQQILFLKEMGFSLKETANMLVKGELDLKNS
LEKQLRFVQEEQKKFNRMESVLQAVVYSVDVEGELDWKVMFELIQLSKQSSRIREIFQNEVFSKEEQKLLHNLPNMSKED
LNVLEWVDLLKQFRTFMKDGKEVASDEVQGATKKLMQKCLEMANGDEAFLDKLWEVRKSKEDSQKMSLYPIEEELLLYMD
EAFRVYDEKERDK

Sequences:

>Translated_253_residues
MVVISIQQLTRETGVTVRTLRYYDQIDLLKPSGKTEGGHRLYSEADVIRLQQILFLKEMGFSLKETANMLVKGELDLKNS
LEKQLRFVQEEQKKFNRMESVLQAVVYSVDVEGELDWKVMFELIQLSKQSSRIREIFQNEVFSKEEQKLLHNLPNMSKED
LNVLEWVDLLKQFRTFMKDGKEVASDEVQGATKKLMQKCLEMANGDEAFLDKLWEVRKSKEDSQKMSLYPIEEELLLYMD
EAFRVYDEKERDK
>Mature_253_residues
MVVISIQQLTRETGVTVRTLRYYDQIDLLKPSGKTEGGHRLYSEADVIRLQQILFLKEMGFSLKETANMLVKGELDLKNS
LEKQLRFVQEEQKKFNRMESVLQAVVYSVDVEGELDWKVMFELIQLSKQSSRIREIFQNEVFSKEEQKLLHNLPNMSKED
LNVLEWVDLLKQFRTFMKDGKEVASDEVQGATKKLMQKCLEMANGDEAFLDKLWEVRKSKEDSQKMSLYPIEEELLLYMD
EAFRVYDEKERDK

Specific function: Global transcriptional regulator that activates transcription of bmr and blt by binding directly to their promoter. Stimulates also the expression of the mta gene itself, ydfK and ymfE [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 29825; Mature: 29825

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVISIQQLTRETGVTVRTLRYYDQIDLLKPSGKTEGGHRLYSEADVIRLQQILFLKEMG
CEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
FSLKETANMLVKGELDLKNSLEKQLRFVQEEQKKFNRMESVLQAVVYSVDVEGELDWKVM
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FELIQLSKQSSRIREIFQNEVFSKEEQKLLHNLPNMSKEDLNVLEWVDLLKQFRTFMKDG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KEVASDEVQGATKKLMQKCLEMANGDEAFLDKLWEVRKSKEDSQKMSLYPIEEELLLYMD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH
EAFRVYDEKERDK
HHHHHHHHHHCCC
>Mature Secondary Structure
MVVISIQQLTRETGVTVRTLRYYDQIDLLKPSGKTEGGHRLYSEADVIRLQQILFLKEMG
CEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
FSLKETANMLVKGELDLKNSLEKQLRFVQEEQKKFNRMESVLQAVVYSVDVEGELDWKVM
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FELIQLSKQSSRIREIFQNEVFSKEEQKLLHNLPNMSKEDLNVLEWVDLLKQFRTFMKDG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KEVASDEVQGATKKLMQKCLEMANGDEAFLDKLWEVRKSKEDSQKMSLYPIEEELLLYMD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHH
EAFRVYDEKERDK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]